PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP028269.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

G2-like

Protein Properties

Length: 570aa MW: 62254 Da PI: 7.188

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP028269.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.8	1.1e-28	106	159	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl PCP028269.1 106 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 159 79*****************.******************************8 PP
2	Myb_DNA-binding	39.7	1.1e-12	108	158	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ PCP028269.1 108 RVVWSVELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 158 678***********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MAPQRTRVER GKRVENVVTG GKVKAGHRQQ QQQRSAAENY TVRKKKNEWR DVEQSGSVEE 60 GDRQQKPSED ADYSSSANEG TWKNSKRRKD EEEETDERDD SSTLKKPRVV WSVELHQQFV 120 GAVNQLGIDK AVPKKILELM NVPGLTRENV ASHLQKYRLY LRRLSGVSQH PNNLSNSFMS 180 PQEASFGAMS SLSGLDLQTL AVTGQLPAQS LATLQAAGLG RSTTKSGVPM PLVDQRNLFS 240 FENPKSRFAE GQHHLSSSKP MNLLHGIPTT MEAKQLANLH QSAQSLGAVN MQVNAHGVQN 300 SSLLMPVAQS QPRGQILNET SGNHVPRLSS SMGHPIMSNG MSSGVSGRNG MVDSGRGGGY 360 NPMQQNSSML NYPLNNSSQL PCNSFTLGST PVMSSLTSKG AFPEDVNSDV KISSGFMPSY 420 DMFNELQQHK SNDWDLQNVG LTFDPSQHTN SMHNSLDPSV LVHQGFSSSQ RGGQSRSPTT 480 VGKALFSMGE GSHLGNVQNT GQHLNGFVVD NTVRIKAESA PDANSQTSFF HEQYGQDDLM 540 SALLKQQQDG IGPAENEFDF DGYSLDNIPV

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MAPQRTRVER GKRVENVVTG GKVKAGHRQQ QQQRSAAENY TVRKKKNEWR DVEQSGSVEE  60
GDRQQKPSED ADYSSSANEG TWKNSKRRKD EEEETDERDD SSTLKKPRVV WSVELHQQFV  120
GAVNQLGIDK AVPKKILELM NVPGLTRENV ASHLQKYRLY LRRLSGVSQH PNNLSNSFMS  180
PQEASFGAMS SLSGLDLQTL AVTGQLPAQS LATLQAAGLG RSTTKSGVPM PLVDQRNLFS  240
FENPKSRFAE GQHHLSSSKP MNLLHGIPTT MEAKQLANLH QSAQSLGAVN MQVNAHGVQN  300
SSLLMPVAQS QPRGQILNET SGNHVPRLSS SMGHPIMSNG MSSGVSGRNG MVDSGRGGGY  360
NPMQQNSSML NYPLNNSSQL PCNSFTLGST PVMSSLTSKG AFPEDVNSDV KISSGFMPSY  420
DMFNELQQHK SNDWDLQNVG LTFDPSQHTN SMHNSLDPSV LVHQGFSSSQ RGGQSRSPTT  480
VGKALFSMGE GSHLGNVQNT GQHLNGFVVD NTVRIKAESA PDANSQTSFF HEQYGQDDLM  540
SALLKQQQDG IGPAENEFDF DGYSLDNIPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-126	ARR-B family protein