PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP028191.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | bHLH | ||||||||
Protein Properties | Length: 235aa MW: 27584.7 Da PI: 9.5772 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.2 | 3.9e-05 | 85 | 127 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++Er RR++ ++++ L +llPk ++ +K i++++ I+ L PCP028191.1 85 INERMRREKHKQSYLALHSLLPKG-----TRSDKNWIVQMTATNIQRL 127 78********************96.....5777777777777777766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 235 aa Download sequence |
MDQCILKALE GELLWYDERP PVVLNQSAFV PYTNTPVIDK LPNDVTKSMN TNKRMLQFLR 60 KSWQPATARN EAEQDSRQRG FRRMINERMR REKHKQSYLA LHSLLPKGTR SDKNWIVQMT 120 ATNIQRLERY KEELIKRNVE LEELLVENEK ERVKWSKIRL KVANPTSGID SMLEVLKCLQ 180 YLGLKARNVH SNFSPEEFSA ELEIETKIGA AEIEEAVQET LNEAERKLRF PFPGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43650.1 | 3e-44 | bHLH family protein |