PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP028053.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 245aa    MW: 27566.4 Da    PI: 9.1402
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP028053.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.39e-51141381128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  lppGfrFhPtdeelv +yL++kv + +l++ ++i+evd++k++PwdLp       +e yfFs+r+ ky++g+r+nrat sgyWkatg dk++++  +g
  PCP028053.1  14 LPPGFRFHPTDEELVLQYLRRKVYSCPLPA-SIIPEVDVCKADPWDLPGD---CAQERYFFSTREAKYPNGNRSNRATGSGYWKATGLDKQIVTCrGG 107
                  79****************************.89***************44...35799*********************************9876589 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrl 128
                  ++vg+kktLvfy+g+ p+g++tdW+mheyrl
  PCP028053.1 108 QVVGIKKTLVFYRGKPPHGTRTDWIMHEYRL 138
                  99***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MERINFVKNG VLRLPPGFRF HPTDEELVLQ YLRRKVYSCP LPASIIPEVD VCKADPWDLP  60
GDCAQERYFF STREAKYPNG NRSNRATGSG YWKATGLDKQ IVTCRGGQVV GIKKTLVFYR  120
GKPPHGTRTD WIMHEYRLVL PENPASIAPP EKNATQWLIV VGGEGEGRLD HEGGGVMAAD  180
EMGHQRDEVR NKAEVKGLRR LESEEEELGF PAIPNTPESS PRSSLANRRN RVSMAKIRLQ  240
LGFPI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.16e-87NAC family protein