PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027581.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 321aa    MW: 35646.2 Da    PI: 6.9812
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027581.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM179.39.9e-56161441129
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 
                  lppGfrFhPtdeel+++yL kkv +++++  ++i+evd++k+ePw+Lp k+k +ekewyfFs rd+ky+tg r+nrat++gyWkatgkd+e++s+ + 
  PCP027581.1  16 LPPGFRFHPTDEELITYYLLKKVLDSSFTG-RAIAEVDLNKCEPWELPDKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSkTC 112
                  79*************************999.89***************99999****************************************97455 PP

          NAM  98 elvglkktLvfykgrapkgektdWvmheyrle 129
                  +lvg+kktLvfy+grapkgek++Wvmheyrle
  PCP027581.1 113 ALVGMKKTLVFYRGRAPKGEKSNWVMHEYRLE 144
                  67****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDIMSFSTQF DHNTHLPPGF RFHPTDEELI TYYLLKKVLD SSFTGRAIAE VDLNKCEPWE  60
LPDKAKMGEK EWYFFSLRDR KYPTGLRTNR ATEAGYWKAT GKDREIYSSK TCALVGMKKT  120
LVFYRGRAPK GEKSNWVMHE YRLEGKFAYH YLSRSSKTRM GNGSTSSVSL CPEPSSPSSV  180
SLPPLLDSSP YQPVSAAGDG CSYDSPIPME HVSCFSTNPS NNGFNLPASC FDLAHPPPPQ  240
PPNFGGVSAF PSLRSLQENL QLPLFFSPMP AHPPVHVGSS VAGGGSSVDF TGNWPPVSEE  300
VRAVGPTELD CMWNYFKTEC L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53950.13e-94NAC family protein