PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP027470.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 347aa    MW: 38476.3 Da    PI: 5.5888
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP027470.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.53.1e-29136197159
                  ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                  ldDg++WrKYGqK++ g+++pr+YYrCt++   +C ++k+v+rs+edp+++eitY+g+H+++
  PCP027470.1 136 LDDGFSWRKYGQKDILGARYPRGYYRCTHRnvqDCFATKQVQRSNEDPTIFEITYRGRHTCT 197
                  59***************************98999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MENCNIHWEQ RSLVNELAQG RELARQLQIH LNAPSSSHGT RELLVQKIIL SYEKALSILN  60
SIGSPSGCEQ QQPAGHVATR MVESPPHSLN GSPWSEDSDR EFKDHDNKDS SGKRKTLSRW  120
TQQIRVTSGM GLEGPLDDGF SWRKYGQKDI LGARYPRGYY RCTHRNVQDC FATKQVQRSN  180
EDPTIFEITY RGRHTCTQAS PGTSTPPSPS PLPPERTEPQ NNPVESQQNQ QHSQQNMLLN  240
LPEGLRVISE GLDISEELFP SFNNPSPLNN NYLGSFSPPF AGPTTSGTNY FSMSQQGFGA  300
EQNIQSGDII SPATSAANSP SVGLDFPFGQ DDQLFPNFSF DGPGFFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.13e-54WRKY family protein