PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026901.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 536aa MW: 60544.8 Da PI: 8.2669

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026901.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	73	7.4e-23	319	388	61	128
NAM 61 FskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 s kk+ +g r+nr+t++g+Wkatg+d++++s ++ +gl+ktLvfykgrap+g+ktdWvm+eyrl PCP026901.1 319 VSYLLKKHGSGGRPNRTTETGFWKATGSDRKIVSLsePKRIIGLRKTLVFYKGRAPRGSKTDWVMNEYRL 388 5555678899********************997556677*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
MATPGVSPVA PLGPTVSMAA ASSTSSMMHP VLSAQWTYRQ PHTSEEAQPS GDASSIHREG 60 SQTAATKEQH NALATDIGCV IKNHCPLRWE SWRAVPQETK DAVLYELSHH YKLSNLNSNQ 120 MEYINDLCSS RFTQWKSDLH KHYELYDGPK VALKVGCPIE LLDYRDEWEW LCGHFQDEKY 180 LKKVKANSIN RSKKKLLHRS GSQRFSYRLE GRRKSTMVEK GQTVLEEVAS QLPLKTLIEE 240 RDEQVEMLTS EVVGLKEQIV TQQSQIAAQN NLMYQIGRAL QISGIQFPNV ELPPKMTSHP 300 PDTATTPPAD EYSLTGYVVS YLLKKHGSGG RPNRTTETGF WKATGSDRKI VSLSEPKRII 360 GLRKTLVFYK GRAPRGSKTD WVMNEYRLPD NCQYLKDIVL CKIYRKATSL KVLEQRAAME 420 ENQIKEFHAS PNSSSPPTSM ETISFGSQAI QEALTPQIPT KHVVFKQEVE DATLVVAQEQ 480 KGENAMEIKG SPHPIYNLPE LQVPKFSMDW TQDTVWTQMS SPWLQNLTPL ANILNF

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

MATPGVSPVA PLGPTVSMAA ASSTSSMMHP VLSAQWTYRQ PHTSEEAQPS GDASSIHREG  60
SQTAATKEQH NALATDIGCV IKNHCPLRWE SWRAVPQETK DAVLYELSHH YKLSNLNSNQ  120
MEYINDLCSS RFTQWKSDLH KHYELYDGPK VALKVGCPIE LLDYRDEWEW LCGHFQDEKY  180
LKKVKANSIN RSKKKLLHRS GSQRFSYRLE GRRKSTMVEK GQTVLEEVAS QLPLKTLIEE  240
RDEQVEMLTS EVVGLKEQIV TQQSQIAAQN NLMYQIGRAL QISGIQFPNV ELPPKMTSHP  300
PDTATTPPAD EYSLTGYVVS YLLKKHGSGG RPNRTTETGF WKATGSDRKI VSLSEPKRII  360
GLRKTLVFYK GRAPRGSKTD WVMNEYRLPD NCQYLKDIVL CKIYRKATSL KVLEQRAAME  420
ENQIKEFHAS PNSSSPPTSM ETISFGSQAI QEALTPQIPT KHVVFKQEVE DATLVVAQEQ  480
KGENAMEIKG SPHPIYNLPE LQVPKFSMDW TQDTVWTQMS SPWLQNLTPL ANILNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	8e-67	NAC family protein