PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP026861.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 280aa MW: 31504.5 Da PI: 8.1531

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP026861.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80	5.1e-25	12	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppG+rF P++e+l+++yL +k +++ + i+e+d++ ++P +Lp+ ++ ++ ++ ++F+ + + +++r +k gyW+ +g+ ++v PCP026861.1 12 LPPGCRFYPSEEQLLCHYLPNKNAAEAgkSGGYDLIRELDLHGHDPFELPEsacySYGHGGRKRHWFCYTVRVL----KERR-AKGGYWRRQGRVRDV 104 79*****************98887744445678**********9546653333555566666665543....3445.689******** PP NAM 93 lsk.kgelvglkktLvfykgrap.kgektdWvmheyr 127 + + ++ + g + +vfy g++p ++++tdWv+ +y+ PCP026861.1 105 VGRgGKVVLGRRSRFVFYLGNSPnDAVRTDWVLYQYA 141 94555689******886551678*******6 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MGDPKATSLL SLPPGCRFYP SEEQLLCHYL PNKNAAEAGK SGGYDLIREL DLHGHDPFEL 60 PESACYSYGH GGRKRHWFCY TVRVLKERRA KGGYWRRQGR VRDVVGRGGK VVLGRRSRFV 120 FYLGNSPNDA VRTDWVLYQY AQVDHVKAAF VLCRILMRSR SGNRISDHGL SSYAEESACT 180 VRHIGIQHDG FHTPSSSENE VHGDTSVPRK NEMSKYPGLD PELDDRVMTR PVSISRIQSN 240 EQVPASVLGG RNPILLDNLA AKHLHSIMEG DFIELDDLID

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	1e-17	NAC family protein