PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP025985.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 229aa MW: 26070.5 Da PI: 4.8165 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 96.7 | 3.5e-30 | 35 | 167 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevls 94 lp G+rF+Pt++e+vv++L +k+ ++ +++ ikevd+y+++P++Lp+ k++a+ + y+F++r+ a++ + + a++ gyWk + evl PCP025985.1 35 LPLGYRFNPTEDEIVVYFLFNKIMDRAMPTYGLIKEVDVYEYDPHQLPNgdfKHNAGCNAAYYFANREPFDASEGKIIKtAANGGYWKVIDDEYEVLF 132 699***************************999***************5455666677788*******999976666665999************999 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 k ++ vg ++ fy+g+ap+g+kt vm+eyrl PCP025985.1 133 KdSEVIVGFEAVMNFYEGKAPNGTKTPFVMNEYRL 167 8455669**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MASSASSQSA DKYEGFDLLK CSTVQEGKKE ADVRLPLGYR FNPTEDEIVV YFLFNKIMDR 60 AMPTYGLIKE VDVYEYDPHQ LPNGDFKHNA GCNAAYYFAN REPFDASEGK IIKTAANGGY 120 WKVIDDEYEV LFKDSEVIVG FEAVMNFYEG KAPNGTKTPF VMNEYRLNPR VVPAHVLNDS 180 IRNKIERYVV CRIINEEVSN QPVIDYRKES LELLLKYASA GTVKDVEPK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 9e-28 | NAC family protein |