PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP025134.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 351aa MW: 39817.8 Da PI: 6.8318

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP025134.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	179.6	8.1e-56	16	142	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkge 98 lppGfrFhPtdeelv++yL +kv ++ + + ++i evd++k+ePwdLp k+k +ekewyfF+ +d+ky+tg r+nrat++gyWkatgkdke+++ ++ PCP025134.1 16 LPPGFRFHPTDEELVSHYLSPKVLDNFFCA-RAIGEVDLNKCEPWDLPWKAKMGEKEWYFFCVKDRKYPTGLRTNRATEAGYWKATGKDKEIYK-AKT 111 79**********************9888.89***********888999************************************.999 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfy+grapkg+kt+Wvmheyrle PCP025134.1 112 LVGMKKTLVFYTGRAPKGVKTNWVMHEYRLE 142 ***************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MENTSGFIME DEKMELPPGF RFHPTDEELV SHYLSPKVLD NFFCARAIGE VDLNKCEPWD 60 LPWKAKMGEK EWYFFCVKDR KYPTGLRTNR ATEAGYWKAT GKDKEIYKAK TLVGMKKTLV 120 FYTGRAPKGV KTNWVMHEYR LEGESSTHNL PKTAKNEWVI CRIFQKSSGG KKTHISGLLR 180 PSPFGNELRP SLLPPLMDSP AYNSDARTTA TACETSHVSC FSDPAEDQKT EDDIMDSFNN 240 SYNHHHHHNI HFASSSRSNP SAHLNSFYSN QIPPNIGLLH HQNSVLMQDP SLLTMLVENH 300 APNLRRSAKI EFSPDTGLSI DASSVVSNRE MVQDDPSYSS APIELDGLWN Y

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MENTSGFIME DEKMELPPGF RFHPTDEELV SHYLSPKVLD NFFCARAIGE VDLNKCEPWD  60
LPWKAKMGEK EWYFFCVKDR KYPTGLRTNR ATEAGYWKAT GKDKEIYKAK TLVGMKKTLV  120
FYTGRAPKGV KTNWVMHEYR LEGESSTHNL PKTAKNEWVI CRIFQKSSGG KKTHISGLLR  180
PSPFGNELRP SLLPPLMDSP AYNSDARTTA TACETSHVSC FSDPAEDQKT EDDIMDSFNN  240
SYNHHHHHNI HFASSSRSNP SAHLNSFYSN QIPPNIGLLH HQNSVLMQDP SLLTMLVENH  300
APNLRRSAKI EFSPDTGLSI DASSVVSNRE MVQDDPSYSS APIELDGLWN Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61430.1	1e-129	NAC family protein