PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP024743.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 468aa MW: 53524.4 Da PI: 4.7476

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP024743.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.8	2.9e-25	8	141	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkya..tgkrknratksgyWkatgkdkev 92 p+G++FhP+deelv +yL++kv+g++++ e+vi+++d+y + e +d+ + + ++ +++yfF+k + +++ tg+r r++ sg+W+ + + +ev PCP024743.1 8 PVGYKFHPRDEELVGYYLRNKVRGSPFKDENVIPDLDLYGSmEARDIWNnnggQNLGKGEDLYFFTKLKPTSSkgTGSRMARTIGSGTWHGQNSGTEV 105 89*************************99***965499999632444323366789988766633788**************** PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ ++e++g k +++ + + p+ e+ W+mhe++l PCP024743.1 106 KDPkTKETIGWWKRFTYANTKYPQ-ENGCWIMHEFSL 141 99867888******988888.8999****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 468 aa Download sequence
MASANDFPVG YKFHPRDEEL VGYYLRNKVR GSPFKDENVI PDLDLYGSME ARDIWNNNGG 60 QNLGKGEDLY FFTKLKPTSS KGTGSRMART IGSGTWHGQN SGTEVKDPKT KETIGWWKRF 120 TYANTKYPQE NGCWIMHEFS LDPKLAMYIK SNNSRTSNGD EYVVCRIRKN YDRKRKADDR 180 EETRVVESQR NKIQRQFENI DESYVTPVSS EVAEDVNTDH YPQQQKPQQE QQTNPQHNSF 240 VNNVDHYYNQ QQQEHCNVTD FPQYYYDSQE LMARPEAACP TLASSYTQDP SSGTVFSHYD 300 LPQTSTTGFA NQPYHFVTQD QPNYFVADPT MASSLSRASQ EDYLQHNDFV NNVIDLPQYH 360 YSSAQPSSGT VLSQYDPPQT GTTGFANHPH HFVTQDQPNY CVADSTMASS LASPANIDQN 420 YPVMNDKDQL PLPNFEYSQL FYEAEGGHDI MIDLDDLWND MVQPAAVL

Sequence ? help Back to Top

Protein Sequence Length: 468 aa Download sequence

MASANDFPVG YKFHPRDEEL VGYYLRNKVR GSPFKDENVI PDLDLYGSME ARDIWNNNGG  60
QNLGKGEDLY FFTKLKPTSS KGTGSRMART IGSGTWHGQN SGTEVKDPKT KETIGWWKRF  120
TYANTKYPQE NGCWIMHEFS LDPKLAMYIK SNNSRTSNGD EYVVCRIRKN YDRKRKADDR  180
EETRVVESQR NKIQRQFENI DESYVTPVSS EVAEDVNTDH YPQQQKPQQE QQTNPQHNSF  240
VNNVDHYYNQ QQQEHCNVTD FPQYYYDSQE LMARPEAACP TLASSYTQDP SSGTVFSHYD  300
LPQTSTTGFA NQPYHFVTQD QPNYFVADPT MASSLSRASQ EDYLQHNDFV NNVIDLPQYH  360
YSSAQPSSGT VLSQYDPPQT GTTGFANHPH HFVTQDQPNY CVADSTMASS LASPANIDQN  420
YPVMNDKDQL PLPNFEYSQL FYEAEGGHDI MIDLDDLWND MVQPAAVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	1e-20	NAC family protein