PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP024648.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 182aa MW: 20047.1 Da PI: 10.4292 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 68.4 | 1.4e-21 | 46 | 96 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++++GVr ++ +gr++AeIrd ++ ++r +lg+f+taeeAa+a+++a+++l+g PCP024648.1 46 PHFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAALSLRG 96 689*******.**********883....5*************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MSTVDALHLR DTALSLAVEP PSPPPGIPRP QPKHAAPVQA GAGKDPHFRG VRKRPWGRFA 60 AEIRDPWKKT RKWLGTFDTA EEAARAYDEA ALSLRGPKAK TNFGNLALVP PHSLLLGGGS 120 EMFWPPPPMY FMSGAPAVAP IRSEYRGYKL ENVDAVGGQE EKKMRKDKKP FLFDLNLPAP 180 LF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53170.1 | 1e-22 | ERF family protein |