PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024513.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 349aa    MW: 37456.7 Da    PI: 7.5373
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024513.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.66.3e-33113170260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  + vrY+eClkNhAa++Gg+++DGCgEfmps geegt++alkCaAC+CHRnFHR+ev+ e
  PCP024513.1 113 KVVRYRECLKNHAANIGGNVFDGCGEFMPS-GEEGTMEALKCAACDCHRNFHRKEVDGE 170
                  579**************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MDFRAQDNEM RTSGSLSYAH LNTKESSPSP AAAADHQQKR RVGIHNGTGN YGSATAPHHQ  60
HQTLDNYHPA AIPLPPLIRD PDPDRALSGT PVAPQGAGVG GGGGGGGPKS LAKVVRYREC  120
LKNHAANIGG NVFDGCGEFM PSGEEGTMEA LKCAACDCHR NFHRKEVDGE TAAFSPGSRR  180
SSIMLSPLQL PPPLPSPSSA LHHHHHHHHH QKYAMPPIVQ PVNVAFGSSG GGTESSSEDL  240
NAFEGGTVPP FASSKKRFRT KFTVEQKERM MEFGEKVGWR IQKQDEEEVE RFCAEVGVKR  300
QVLRVWMHNN KNTIKKQGDV AATTNAIATG LSFKNVEGEG GEGGAAAED
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75240.11e-65ZF-HD family protein