PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP024134.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 275aa    MW: 29756.5 Da    PI: 7.3924
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP024134.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.52.2e-20120169255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+W+AeIrdp     r +r++lg+f taeeAa+a+++a+ +++g
  PCP024134.1 120 KYRGVRQRP-WGKWAAEIRDP----LRaARVWLGTFETAEEAARAYDKAAVEFRG 169
                  8********.**********7....368***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MPSRMSRIQQ EQEHCIMVAA LKHVISGGSS SGPTPEHLQP MTAVYNATCT QSAAGQRAQR  60
EDMLAFLLDG DTCRLCGIPG CLGCNYFPPT LPNRNKKPQL SLGTGFVGMN GATTRKSKNK  120
YRGVRQRPWG KWAAEIRDPL RAARVWLGTF ETAEEAARAY DKAAVEFRGN RAKLNFPLNP  180
DVNIVTSNNS SSSGTGANAG QSQPGDSTRE YGIGGGGATA ESSVGHEEDD QFLLWDKDFL  240
QDGEADDLLA AHKLVFVPFL LCATVLDKFF NVLGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.13e-32ERF family protein