PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023785.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 368aa MW: 40967.6 Da PI: 4.8032

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023785.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	51.6	3.1e-16	8	153	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdiy..kvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk..s 80 +p GfrF+Ptd+el+ ++L+ + +++ l+ ++++++++++ ++eP+++ + +++a ++ +yfFs+ kk+++g++ r++ PCP023785.1 8 VPTGFRFKPTDQELIGRFLRYFLVETPrllppLPHHTFMHKCNLFgnHSEPSEIWEafggggalQLAAADQpALYFFSELTKKNPKGSNIMRKMGrsG 105 589****************999999899887776789862267974478888874444444488***********9999654447 PP NAM 81 gyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 g W + v + +++ +glk+t+ + + +++ + W+++ey+l PCP023785.1 106 GNWDGKAVPAWVEGTdgTSTCIGLKRTFSYKNVGSED--HGAWLLDEYSL 153 89988888888776545566*******9654444..79*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MEINHSLVPT GFRFKPTDQE LIGRFLRYFL VETPRLLPPL PHHTFMHKCN LFGNHSEPSE 60 IWEAFGGGGA LQLAAADQPA LYFFSELTKK NPKGSNIMRK MGRSGGNWDG KAVPAWVEGT 120 DGTSTCIGLK RTFSYKNVGS EDHGAWLLDE YSLFAAPRKR KSHTSYDFDY VLCRLRKTCP 180 SSSSSEDDQV TASTKNGINK RKCPTSPSFE DQVTTSNKRK KNQRANEEIK SDDDQEAGSK 240 QNMNLIDVVE EEEGQGNSCL TSNDPRLTIT VAESNETVDK APTDGAVEEE VLSPTAFALK 300 EFLLSEPAEV LMPTASEVAG DGRVEELYAE LKEVLHPSMD DCWDRLQLQS LDGGNFWSST 360 FIDEHLNV

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MEINHSLVPT GFRFKPTDQE LIGRFLRYFL VETPRLLPPL PHHTFMHKCN LFGNHSEPSE  60
IWEAFGGGGA LQLAAADQPA LYFFSELTKK NPKGSNIMRK MGRSGGNWDG KAVPAWVEGT  120
DGTSTCIGLK RTFSYKNVGS EDHGAWLLDE YSLFAAPRKR KSHTSYDFDY VLCRLRKTCP  180
SSSSSEDDQV TASTKNGINK RKCPTSPSFE DQVTTSNKRK KNQRANEEIK SDDDQEAGSK  240
QNMNLIDVVE EEEGQGNSCL TSNDPRLTIT VAESNETVDK APTDGAVEEE VLSPTAFALK  300
EFLLSEPAEV LMPTASEVAG DGRVEELYAE LKEVLHPSMD DCWDRLQLQS LDGGNFWSST  360
FIDEHLNV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	163	KRKSH
2	200	221	KRKCPTSPSFEDQVTTSNKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52890.1	7e-06	NAC family protein