PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023773.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family EIL
Protein Properties Length: 434aa    MW: 48933.1 Da    PI: 5.6495
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023773.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3387.71.7e-118303341296
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  +elkkrmwkd ++l++lke++k   ++++++ + ++s+  +e +rrkkm+raQD+iLkYM+k+mevc+a+GfvYgi+pe+gkpv+g+sdsLr+WWk+k
  PCP023773.1  30 DELKKRMWKDSIRLQKLKENRKIIEAEEDEEEEPAESSAKQEGSRRKKMARAQDSILKYMVKIMEVCKAKGFVYGIVPETGKPVTGSSDSLREWWKDK 127
                  79******************998655555668888999************************************************************ PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196
                   +fd n+p+ai++y    li++ges+      s+ h l+elqDTtlgSLLsal+qhc ppqrrfplekg++pPWWPtGke wwg +gls ++g+ppy+
  PCP023773.1 128 ARFDHNAPIAIAEY-LPSLIFEGESDH----GSYAHLLHELQDTTLGSLLSALIQHCVPPQRRFPLEKGLAPPWWPTGKEMWWGDQGLSVEHGAPPYR 220
                  **************.779***998877....89***************************************************************** PP

                  -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX...XXXXXXXXXXXXXXXXXXXXXX...... CS
         EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah...ssslrkqspkvtlsceqkedve...... 285
                  kphdlkkawkvs L+av+khm+p+++++r+l+ qsk+lqdkm+ake++++++v+n+ee++++        s +++k+ ++++    ++++++      
  PCP023773.1 221 KPHDLKKAWKVSALAAVVKHMAPQSDRVRRLVTQSKCLQDKMTAKETAIWSKVVNHEESLIQLTEKClkiSDHSNKKGKNLKWPATTSNEKRkmmsid 318
                  **********************************************************9885444443333344444444444444333333334455 PP

                  .....XXXXXX.XXXX CS
         EIN3 286 .....gkkeskikhvq 296
                       ++k+s+    q
  PCP023773.1 319 lglgfVEKKSRADYDQ 334
                  5554444444433333 PP
Sequence ? help Back to Top
Protein Sequence    Length: 434 aa     Download sequence    
MVKFHVQVDP LSLGVVAEDE EAAEDHISYD ELKKRMWKDS IRLQKLKENR KIIEAEEDEE  60
EEPAESSAKQ EGSRRKKMAR AQDSILKYMV KIMEVCKAKG FVYGIVPETG KPVTGSSDSL  120
REWWKDKARF DHNAPIAIAE YLPSLIFEGE SDHGSYAHLL HELQDTTLGS LLSALIQHCV  180
PPQRRFPLEK GLAPPWWPTG KEMWWGDQGL SVEHGAPPYR KPHDLKKAWK VSALAAVVKH  240
MAPQSDRVRR LVTQSKCLQD KMTAKETAIW SKVVNHEESL IQLTEKCLKI SDHSNKKGKN  300
LKWPATTSNE KRKMMSIDLG LGFVEKKSRA DYDQGQDQDQ TLCASDQNSG AVSVVDWINM  360
EIEKANRIDD NSGTKVAGGY GSASYWGGGI DDDDLAMDGA LEIQRGNMDL NRSSEDMSHN  420
YDQDSTSIWD LGYD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.11e-118EIL family protein