PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | AT5G65100.1 | ||||||||
Common Name | EIL5, MQN23.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | EIL | ||||||||
Protein Properties | Length: 557aa MW: 63689.6 Da PI: 4.5323 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 457.1 | 1.3e-139 | 38 | 442 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXX..........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksn..........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpv 84 ++lkkrmwkd++l+++lk++k+++l++ ++ t+ +++e++rrkkm+r+QD++LkYM+k+mevc+aqGfvYgi+pekgkpv AT5G65100.1 38 DDLKKRMWKDRNLMCKLKQQKRDNLNSVISSpsssTS----AsssssssvivRRTEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPV 131 79*********************99665554434333....24455899************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXX...XXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--H CS EIN3 85 egasdsLraWWkekvefdrngpaaisky...qaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkel 179 +g+sdsLr+WWke+v+fd+++p+a+s+y +a++li+s+es + ++s+ h+l+elqDTtlgSLLsalmqhc ppqrrfplekg++pPWWP+G+el AT5G65100.1 132 TGSSDSLRRWWKENVQFDQTAPNAVSDYltlAAAQLISSNESLD---PNSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGLAPPWWPNGTEL 226 ******************************999****9988877...99************************************************* PP HHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX..XXXXXXXX CS EIN3 180 wwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss..slrkqspk 273 wwge+g ++ ++g+ppy+kphdl+kawkvsvL+avikhmsp++e++r+l+rqsk+lqdkm+ake++++++vlnqee+ +++++ + + +++ + AT5G65100.1 227 WWGEQGaAAFEHGPPPYRKPHDLRKAWKVSVLAAVIKHMSPNLERVRRLARQSKCLQDKMMAKETDTWSRVLNQEEARLNRLKISdDEdeDRDQEQAR 324 ******9999999********************************************************************99995333232234445 PP XXXXXXXXXXXX.....XXXXXX.XXXXXXXXXX....................................XXXXXXXXXXXXXXXXXXXXX......X CS EIN3 274 vtlsceqkedve.....gkkeskikhvqavktta....................................gfpvvrkrkkkpsesakvsskevsrtcq 330 +t+ +++ ++ +++e+ +++++k+ + ++p+ +krk +++e++++ s+ ++tcq AT5G65100.1 325 FTCFDQEPSLNTcfivgQDQEPL-GSMRKDKRVDqefssndcflvaqdqeprkgkkadqewspnscflvdQEPLGNKRKGEFVEKEAMLSN--VYTCQ 419 5555554444449***5555555.78999999889******************************************************99..7**** PP XXXXXX.XXXXXXXXXXXXXXXX CS EIN3 331 ssqfrgsetelifadknsisqne 353 +s++++s+++l+f dkn ++ +e AT5G65100.1 420 NSSCPSSDVSLGFVDKNLRTGHE 442 ********************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 2.9E-125 | 38 | 302 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.2E-67 | 178 | 309 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.09E-58 | 180 | 305 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Plant Ontology ? help Back to Top | ||||||
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PO Term | PO Category | PO Description | ||||
PO:0009046 | anatomy | flower | ||||
PO:0007611 | developmental stage | petal differentiation and expansion stage |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence Send to blast |
MVEVQDLEPL SPIQDYDEDD LEEDVDEFER FGEEISYDDL KKRMWKDRNL MCKLKQQKRD 60 NLNSVISSPS SSTSASSSSS SSVIVRRTEA SRRKKMARSQ DSVLKYMMKI MEVCKAQGFV 120 YGIVPEKGKP VTGSSDSLRR WWKENVQFDQ TAPNAVSDYL TLAAAQLISS NESLDPNSYI 180 HMLHELQDTT LGSLLSALMQ HCVPPQRRFP LEKGLAPPWW PNGTELWWGE QGAAAFEHGP 240 PPYRKPHDLR KAWKVSVLAA VIKHMSPNLE RVRRLARQSK CLQDKMMAKE TDTWSRVLNQ 300 EEARLNRLKI SDDEDEDRDQ EQARFTCFDQ EPSLNTCFIV GQDQEPLGSM RKDKRVDQEF 360 SSNDCFLVAQ DQEPRKGKKA DQEWSPNSCF LVDQEPLGNK RKGEFVEKEA MLSNVYTCQN 420 SSCPSSDVSL GFVDKNLRTG HEIECLYGTP ELVNQSSGGG SDGFVRSITT SDDDYSASSK 480 AEDTRDYHNQ DGNWLDYLWF ERLHDLNFSD QGFEDQTSTV DLNQLPDHSD SNQTMNEDDI 540 SLWDMGCEDK DIYMSQD |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 1e-56 | 178 | 308 | 1 | 130 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 1e-56 | 178 | 308 | 1 | 130 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 18424911 | 0.0 | ||||
Genevisible | 247226_at | 0.0 | ||||
Expression Atlas | AT5G65100 | - | ||||
AtGenExpress | AT5G65100 | - | ||||
ATTED-II | AT5G65100 | - |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | AT5G65100.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Phenotype -- Mutation ? help Back to Top | ||||||
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Source | ID | |||||
T-DNA Express | AT5G65100 |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AB013395 | 0.0 | AB013395.1 Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQN23. | |||
GenBank | CP002688 | 0.0 | CP002688.1 Arabidopsis thaliana chromosome 5 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_201315.1 | 0.0 | Ethylene insensitive 3 family protein | ||||
Swissprot | Q9FJQ5 | 0.0 | EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein | ||||
TrEMBL | A0A178UP50 | 0.0 | A0A178UP50_ARATH; Uncharacterized protein | ||||
STRING | AT5G65100.1 | 0.0 | (Arabidopsis thaliana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5879 | 27 | 47 | Representative plant | OGRP563 | 16 | 82 |
Link Out ? help Back to Top | |
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Phytozome | AT5G65100.1 |
Entrez Gene | 836634 |
iHOP | AT5G65100 |
wikigenes | AT5G65100 |
Publications ? help Back to Top | |||
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