PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023726.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 422aa MW: 47989 Da PI: 6.3215

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023726.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.4	4.7e-52	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eel+++yLkkkv++++++l +vi++vd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat +g+Wkatg+dk ++s PCP023726.1 16 VPPGFRFHPTEEELLQYYLKKKVSNQRIDL-DVIRDVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATVAGFWKATGRDKVICS- 111 69**************************.9***********964444222455********************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +g++ktLvfykgrap+g+k+dW+mheyrl PCP023726.1 112 NCRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144 8889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 422 aa Download sequence
MAPENMSISV NGQSQVPPGF RFHPTEEELL QYYLKKKVSN QRIDLDVIRD VDLNKLEPWD 60 IQEKCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATVAGFW KATGRDKVIC SNCRRIGMRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDNNTS NCNITNVSTV MGEAAQDEGW VVCRIFKKKN 180 LHKSFSSPIL SSTTSSIITE TRSGQSLFDS CPDGALEQIL QYMERTCKEE ENEAYINNIS 240 TRFNLQPINT GISNTSNHNG FHERFSKRPT LESPNSTSSQ DCYQPNIHEE MMVTEKNNNQ 300 VSPFTDNHQN IDYDAHHMDS GLTSWAALDH LVASQLNGQT EASSQLACFS TDPHDTIVYD 360 NNDHDHELQL PNTLRGSLSS SNKSYHATHH YNNSEIDLWN FDRQSASLSS SDTLCLVSNG 420 PI

Sequence ? help Back to Top

Protein Sequence Length: 422 aa Download sequence

MAPENMSISV NGQSQVPPGF RFHPTEEELL QYYLKKKVSN QRIDLDVIRD VDLNKLEPWD  60
IQEKCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATVAGFW KATGRDKVIC SNCRRIGMRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDDNNTS NCNITNVSTV MGEAAQDEGW VVCRIFKKKN  180
LHKSFSSPIL SSTTSSIITE TRSGQSLFDS CPDGALEQIL QYMERTCKEE ENEAYINNIS  240
TRFNLQPINT GISNTSNHNG FHERFSKRPT LESPNSTSSQ DCYQPNIHEE MMVTEKNNNQ  300
VSPFTDNHQN IDYDAHHMDS GLTSWAALDH LVASQLNGQT EASSQLACFS TDPHDTIVYD  360
NNDHDHELQL PNTLRGSLSS SNKSYHATHH YNNSEIDLWN FDRQSASLSS SDTLCLVSNG  420
PI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-132	NAC family protein