PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP023637.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

YABBY

Protein Properties

Length: 232aa MW: 26074.6 Da PI: 7.8832

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP023637.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	241	2.4e-74	20	195	2	170
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkee........lleelkveeenlksnvekees 91 ++ s+++q+Cyv+CnfC+t+lavsvP +slfk+vtvrCGhC++l+svn++ ll+ ++ ++ ++ llee +++ +n+ +n++ + PCP023637.1 20 HLLSATDQLCYVHCNFCDTVLAVSVPCSSLFKTVTVRCGHCSNLISVNMRAL--LLPPANNNNQLHLPHpffstphnLLEEIRNTPSNTMMNHQPCYT 115 56789***************************************776554..44444443444555557775666777777777766666665555 PP YABBY 92 astsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++ ++ ++ +e+p++p v+rPPekrqrvPsaynrfikeeiqrika+nPdishreafsaaaknWahfP+ihfgl PCP023637.1 116 NESIMPIRGEGFDHLQEIPKPPAvVNRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHFGL 195 5555555555899***99989***************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MSSAAASSTV FNSQDQQHHH LLSATDQLCY VHCNFCDTVL AVSVPCSSLF KTVTVRCGHC 60 SNLISVNMRA LLLPPANNNN QLHLPHPFFS TPHNLLEEIR NTPSNTMMNH QPCYTNESIM 120 PIRGEGFDHL QEIPKPPAVV NRPPEKRQRV PSAYNRFIKE EIQRIKAGNP DISHREAFSA 180 AAKNWAHFPH IHFGLMPDQP VKKTNMRQQE GDDMLVKDGF FNTPANVGVS PY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45190.1	4e-83	YABBY family protein