PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP023248.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 292aa    MW: 32283.6 Da    PI: 7.7623
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP023248.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.91.4e-402788263
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                 +e+alkcprCdstntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  PCP023248.1 27 PEQALKCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 88
                 7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MSAQSLDMLV CSKSQQQQQD RKPRPQPEQA LKCPRCDSTN TKFCYYNNYS LTQPRYFCKS  60
CRRYWTKGGT LRNVPVGGGC RKNKRSSSTK RAQDQPLTPN SNPLPALGYD SNDLTLAFAR  120
LQRQQSCGGQ LGFDDHDHIT LLGNPTNAPD HNILGNPTSA PGFLDALRTG FLETHNGNFQ  180
NLYNYGYGSG NGNLGEVEDC GGGMGIHHPF EEATTNSTTT AVTVTTMKQE LFNGQSESSN  240
RVLWGFPWQM NGGDHHSNMM GNGNHEYDSG RESWNGIASS WQHGLLHTTP LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.17e-49Dof family protein