PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022672.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 246aa MW: 28256 Da PI: 10.1095

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022672.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	98.5	9.9e-31	1	134	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..k 96 +p+G+rF+Pt eelv +yL +k+++ +l++ ++i+e+d+++++P+ Lp v +e++++f+ ++ +ky +ra+ gyWk gk+k+++++ + PCP022672.1 1 MPVGCRFRPTGEELVIHYLMRKLHAAPLPA-SIIPEFDVFQTHPSGLPGDV--RETRYFFYNENMNKY----VGKRAAGCGYWKPIGKKKQIVANskS 91 699*************************.89***********554..556666666666666....46889999*********98667 PP NAM 97 gelvglkktLvfy...........kgrapkgektdWvmheyrl 128 +e+vg++ktL f +++++++++t+W+mheyrl PCP022672.1 92 NEAVGIRKTLGFCerkrrgchnhhHESTSTTTQTRWLMHEYRL 134 778******7777666655446777788*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MPVGCRFRPT GEELVIHYLM RKLHAAPLPA SIIPEFDVFQ THPSGLPGDV RETRYFFYNE 60 NMNKYVGKRA AGCGYWKPIG KKKQIVANSK SNEAVGIRKT LGFCERKRRG CHNHHHESTS 120 TTTQTRWLMH EYRLVASQAN PTQAFKAGVG NWVLFRIFQK KRRPTQRTSD DMGVVSQRLS 180 KCKRNRRLME EYISAADHRS RRSDPNLTTF SSPSCSSDIT HELTSNDNGE LDDDQEEHSV 240 SMRINI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G13180.1	4e-35	NAC family protein