PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022283.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

DBB

Protein Properties

Length: 242aa MW: 26524.9 Da PI: 4.8915

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022283.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	20.5	1e-06	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ PCP022283.1 4 QCDVCEKAQATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7****99*******************65667777765 PP
2	zf-B_box	32	2.6e-10	55	97	2	38
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 + ++C+ +++k + +fC +++ l+C+dC +++H+ H+ PCP022283.1 55 KLPRCDICQDKAAFIFCVEDRALVCQDCDESIHSAnsrsanHQ 97 789******************************6556666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 242 aa Download sequence
MKIQCDVCEK AQATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLECL SKSNKLPRCD 60 ICQDKAAFIF CVEDRALVCQ DCDESIHSAN SRSANHQRFL ATGIRVALSS GCSKDTEPSS 120 LEPPSSHSSH KIVSTKVPTP QPSGFSSPWG VDDLLQLSDF ESSDKKESFE FGELEWIADM 180 GIFGVEQFPQ KALAAAEVPQ LPPSQATNFT SYRPAKSNSP YKKPRIEMLE DDDDHFTVPD 240 LG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	2e-95	DBB family protein