PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP022136.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

TCP

Protein Properties

Length: 380aa MW: 39777.2 Da PI: 5.6452

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP022136.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.2	4.2e-36	91	197	2	105
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.......eaesssssasnsssgkaak 92 ++++++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++ +a ++ + +ss s++ ++++ PCP022136.1 91 PTRRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTVPAIAVsvggtlkIPTTSSTSVED----NSSP 184 6899************************************************************88888444333332312222222221....2222 PP TCP 93 saakskksqksaa 105 ++a++k+++ s++ PCP022136.1 185 TSATKKRKRPSNS 197 2222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MTSYLEDQDE DGGASDLSTS TGDPGDNDHT NGDGVVSMQP NYEETTEFHS LKEEPIDSDP 60 QQPPQGHPIG MLPDTMQMPM PMSVQLPVSA PTRRSSTKDR HTKVEGRGRR IRIPATCAAR 120 IFQLTRELGH KSDGETVRWL LEHAEQAIIE ATGTGTVPAI AVSVGGTLKI PTTSSTSVED 180 NSSPTSATKK RKRPSNSEFM DVRKDAVSQS SGLAPVSPTA PQGLVPVWAV GGAGLIVPAN 240 AFWMGPVGSG AGPSDPQPQI WALSPTMTPV FNMVGAARPI SSFVVNSGGG AGGVEVRAPS 300 PALSNSAAST STVGARAAKR SSTTMAPPSV SSSSNNSNGS GSGATTKTQM LRDFSLEIYD 360 KQELKFMDQP VGPAHQQQTQ

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MTSYLEDQDE DGGASDLSTS TGDPGDNDHT NGDGVVSMQP NYEETTEFHS LKEEPIDSDP  60
QQPPQGHPIG MLPDTMQMPM PMSVQLPVSA PTRRSSTKDR HTKVEGRGRR IRIPATCAAR  120
IFQLTRELGH KSDGETVRWL LEHAEQAIIE ATGTGTVPAI AVSVGGTLKI PTTSSTSVED  180
NSSPTSATKK RKRPSNSEFM DVRKDAVSQS SGLAPVSPTA PQGLVPVWAV GGAGLIVPAN  240
AFWMGPVGSG AGPSDPQPQI WALSPTMTPV FNMVGAARPI SSFVVNSGGG AGGVEVRAPS  300
PALSNSAAST STVGARAAKR SSTTMAPPSV SSSSNNSNGS GSGATTKTQM LRDFSLEIYD  360
KQELKFMDQP VGPAHQQQTQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-68	TCP family protein