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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PCP021889.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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| Family | ERF | ||||||||
| Protein Properties | Length: 229aa MW: 25156.2 Da PI: 6.3982 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 59.3 | 9.3e-19 | 95 | 144 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++GVr+++ +g+++AeIrdp++ng +r++lg++ tae+A a+++a+ k++g
PCP021889.1 95 FRGVRRRP-WGKYAAEIRDPKKNG--ARIWLGTYETAEDAGLAYDRAAFKMRG 144
89******.***********9998..*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 229 aa Download sequence |
MSTESISSSN WALLESIRQH LLHDDFETQE TFLADVAEFD APLLSSPSTP SSSNAHFLVE 60 GLDDTMGIMN HALDTSNNFE VAACVVQVPQ RGWNFRGVRR RPWGKYAAEI RDPKKNGARI 120 WLGTYETAED AGLAYDRAAF KMRGSKAKLN FPHLIGTHDS EPGRVASKRC SLEPSSSSVL 180 SSDGGGSPTL KRKRNVVCSV AKAKLEEGDE PFQVFQLESF SLGSHLLLN |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G44840.1 | 4e-43 | ERF family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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