PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP021888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | ERF | ||||||||
Protein Properties | Length: 301aa MW: 33011.4 Da PI: 7.9899 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 51.3 | 2.8e-16 | 198 | 248 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++kGV++++ +g+++AeIrdp++n r+r + g++ tae+A a+++a+ k++g PCP021888.1 198 HFKGVWRRP-WGKYAAEIRDPKKN--RARMWPGNYETAEDAGLAYDRAAFKMRG 248 69***9999.**********9887..6*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MLYLAMEVVL ILQNGVVVSV HANSIGELLL LVVAEGIGAE VVGEVDAFLH QGTASVAIAG 60 AALVPATAAV SDSSPCPWME ARRKKKETER LGNQCLPYGF PRPRHCSLAR KGFQGALLVD 120 QESFSSSNWA LLESIHEHLL HDDFGTQETV LANVAELDAP LHNYPSTSSS INAHFDLETS 180 SKFDVAARET NALPSGGHFK GVWRRPWGKY AAEIRDPKKN RARMWPGNYE TAEDAGLAYD 240 RAAFKMRGSK AKLNFPHLIG THNSEPDRVT PNVARWSRHL RRSHHRMVAA CQRLSGEGIC 300 S |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 82 | 87 | RRKKKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44840.1 | 7e-34 | ERF family protein |