PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021762.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family Dof
Protein Properties Length: 279aa    MW: 30771 Da    PI: 8.16
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021762.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof129.21.2e-402788263
       zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                 +e+alkcprCdstntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  PCP021762.1 27 PEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSS 88
                 7899******************************************************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MSAHSMDMLV GSKSQQQQQD RKPRPQPEQA LKCPRCDSTN TKFCYYNNYS LSQPRYFCKS  60
CRRYWTKGGT LRNVPVGGGC RKNKRSSSAA KRAQEQPLTP NSNPLPALGY DSNDLTLAFA  120
RLQRQQSCGG QLGFDDHNIL GNPNSAPGFL DGLRTGFLES HNGNFQNLYN YGFGNCNGNL  180
GEVEDCGGGM GIHHPFEEAT TTTSTTTAVT VTTMKQELLN AQSESSNRVL WGFPWQMNGG  240
DHHANMVGNG NHEYDSGRES WNGIASSWQH GLLHTTPLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28510.15e-56Dof family protein