PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021640.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 358aa    MW: 40182.4 Da    PI: 4.4326
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021640.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.42.3e-20121171155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                  ++y+GVr+++ +g+W+AeIrdp     r +r +lg+f+taeeAa  +++a+ kl+g
  PCP021640.1 121 KKYRGVRQRP-WGKWAAEIRDPA----RrQRLWLGTFDTAEEAAMVYDNAAIKLRG 171
                  59********.**********82....35*************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    
MEFLDAESSI LCPIKYTEHR SRTKKLTKPR KKSTSEFNSS VVPRVVRISV TDPDATDSSS  60
DEGEECFGRQ RVKHYINEVS IETDFRNSLV IKNNARKRPA AEVPANRRPM KNAVSPTNGG  120
KKYRGVRQRP WGKWAAEIRD PARRQRLWLG TFDTAEEAAM VYDNAAIKLR GPDALTNFVA  180
PPPKEEEKPE PLVTEPVEVE ANGTTSVSGY DSGSESHNLA SPTSVLHFRS QPSFEEVDEA  240
QRFQMFDRVD EYEDETGTNI LSDDLSDFGN YLPLDLPYFD DAFSFSASES PLFDSPLFFD  300
DGSAAAPDTL PDCFMKDDFS ELFRDTFDAS LSHTTSSMCQ GDDYFQDILF GSDPLVVL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12032RSRTKKLTKPRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.15e-52ERF family protein