PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP021197.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 272aa    MW: 29321.6 Da    PI: 7.5535
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP021197.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer101.84.6e-3265121360
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                   vrY+eClkNhA+ lGgha+DGCgEf+++ g+egt +alkCaAC+CHRnFHR+e+e e
  PCP021197.1  65 MVRYRECLKNHAIGLGGHALDGCGEFLAA-GDEGTLDALKCAACNCHRNFHRKEPEAE 121
                  79**************************9.999*********************9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MEFDEHEEQD EEMELQAAPP GYASVAASSR PKMGPTGEGA APSARKRGTA ATPNSTTTTT  60
AVSTMVRYRE CLKNHAIGLG GHALDGCGEF LAAGDEGTLD ALKCAACNCH RNFHRKEPEA  120
ELIHHQQGAG GSHLLHHHHH PHQFSSGYYR PPPPSGYLIT SPHARPTLAL PAASGGGGGS  180
HSREEGEDVS NPSSSGGGGG GGFGMSKKRH RTKFTQEQKE KMLEFAEKVG WRIQKHDEAA  240
IEEFCSENGV KRHVFKVWMH NNKHTLGKKL VP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.15e-57ZF-HD family protein