PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020635.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 421aa MW: 47815.1 Da PI: 6.5035

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020635.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.2	5.7e-52	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eel+++yLkkk+++++++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s PCP020635.1 16 VPPGFRFHPTEEELLQYYLKKKASNQRIDL-DVIREVDLNKLEPWDIQEKCKIgttPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVICS- 111 69**************************.9***********964444222455********************************99. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +g++ktLvfykgrap+g+k+dW+mheyrl PCP020635.1 112 NCRRIGMRKTLVFYKGRAPHGQKSDWIMHEYRL 144 8889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 421 aa Download sequence
MAPENMSISV NGQSQVPPGF RFHPTEEELL QYYLKKKASN QRIDLDVIRE VDLNKLEPWD 60 IQEKCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIC SNCRRIGMRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDDNNTS NCNITNVPTV VGDAAQEEGW VVCRIFKKKS 180 LHRSLSSPIL SPTTSITSET KSGQSLFDSC PEGALEQIIQ YMGRACKEEE NEAYICNNST 240 RFNLQPINTG ISNTISHIGF HERFLTLPTL DSPNSTSSQD CYQPNIHEEM MVTEVNNNQV 300 SPFTDHHQNM DYHAHHMDSG LTNWAALDRL VASQLNGQTE TSRQLACFIT DPHNTISYDN 360 DDHDHELQLR STLRGSLSSP NKSYQATHDY NNSAIDLWNF DRQSLSLSSS DTLCHVSNGP 420 I

Sequence ? help Back to Top

Protein Sequence Length: 421 aa Download sequence

MAPENMSISV NGQSQVPPGF RFHPTEEELL QYYLKKKASN QRIDLDVIRE VDLNKLEPWD  60
IQEKCKIGTT PQNDWYFFSH KDKKYPTGTR TNRATAAGFW KATGRDKVIC SNCRRIGMRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDDNNTS NCNITNVPTV VGDAAQEEGW VVCRIFKKKS  180
LHRSLSSPIL SPTTSITSET KSGQSLFDSC PEGALEQIIQ YMGRACKEEE NEAYICNNST  240
RFNLQPINTG ISNTISHIGF HERFLTLPTL DSPNSTSSQD CYQPNIHEEM MVTEVNNNQV  300
SPFTDHHQNM DYHAHHMDSG LTNWAALDRL VASQLNGQTE TSRQLACFIT DPHNTISYDN  360
DDHDHELQLR STLRGSLSSP NKSYQATHDY NNSAIDLWNF DRQSLSLSSS DTLCHVSNGP  420
I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-121	NAC family protein