PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020589.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 1137aa MW: 132895 Da PI: 8.938

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020589.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	80.2	4.5e-25	443	562	11	127
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104 d+el +yLk+k+eg ++ ++i+++diy++ePwd + ++ e +wy F++ +k ++++r nr +gyW+ tg+ + + +ge kk PCP020589.1 443 DKELCRYYLKNKLEGVIETTPTIIPDCDIYRMEPWDVIdAaraLTEMPEAKWYLFCPYIRKWERNNRVNRCSPKGYWRITGTPSIIEE-NGEILAQKK 539 9************99888889**********6324433333566****************************887777.999** PP NAM 105 tLvfykgrapkgektdWvmheyr 127 t+++y gr +e t+Wvm ey+ PCP020589.1 540 TITYYLGRPAAAELTEWVMYEYS 562 ********************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 1137 aa Download sequence
MDSSRGRGRG RASPRGGRGS PIMQQVPRFD TTKAINRPQS RVPNTMAKGS SSAQDKPRAT 60 YNFYPQPDKT MIEVINEQFS QRLERMQLFY TEQVSLFPCA YEETQQALNH LWIAGNRLKD 120 GREAAMSYFL ATLSFIKILI KDFERRILEL EEANKAKKNF YVLFNGPKPG IYVEWAEVVG 180 LYPDSKSRQC KGYATLNDAI IAIRKAAVQN PYYDPKVIAV QEKQDANQVL QQPGNYQQLV 240 NDNIKQQLLE LQEENAKLLQ QQKELQETVA EKEKWIKDME MHFPGRGLGK AQQYPILGKQ 300 SRPIDLISNP FQISYHKPAV KKEEDRKPGQ LRFDDVFNRY AGEGSSSAIK GGDEHQEFLM 360 NIDQREVNLR PKGSPAKETR GLTEEQIERW AQGLTAQDQE LTEDEEVEGS QGSNNALSKE 420 EIMEITASVT QEVIRRVNQK KADKELCRYY LKNKLEGVIE TTPTIIPDCD IYRMEPWDVI 480 DAARALTEMP EAKWYLFCPY IRKWERNNRV NRCSPKGYWR ITGTPSIIEE NGEILAQKKT 540 ITYYLGRPAA AELTEWVMYE YSPYKLNTFA TWAVCALKYR GPSLRRRQVK ESSHLSDWDS 600 ILPLINHENA DIRLKRLLLR YRLSKAELKL KGKINLSLND RVSSEEKERR QMVVHMARKE 660 VEMLKEKVVQ IMHCHPRQIR EIIATEGGIP KEPFEDQRQR CAEEERYMEI EVRDEASTSA 720 PRLPPPATTA QIEEWLLEED RFNKGLGRPK YMLDTLAAYI SQLESLVKAT NTQTTLQQFN 780 KRIFEIERKF GCIGTTNPDA DKQETSLQKM TDDKGPTCNE KNTSKERSRA PRRIRCSHQE 840 ITDRTYSGHS DHYKHSFFGM ASNKMLKRSV SEGDLKKLKE RIEPVQKFQW FEEMQRRSKD 900 LQVRELVWRL NHERYMVRQV QLKNMRIQER LKEAEKMRDL IVKGHKSHER DLEEEIKMLR 960 KQNEVLRLPV CDQVRELTSR INAEKMKTRK LDFKDNEIPW EEDNVSQVSY EEFPKEAVQE 1020 KPNWEDPQWK NLSSDGYQKY QYKVKMSPPA WATNVDTALD PVQPTGWEDE EEMASQLLQR 1080 PWFKKIIEGS IAKYVKAMGE RIWKLSQRLG EAEARINELE EQNQRLLAKI AEQWRKH

Sequence ? help Back to Top

Protein Sequence Length: 1137 aa Download sequence

MDSSRGRGRG RASPRGGRGS PIMQQVPRFD TTKAINRPQS RVPNTMAKGS SSAQDKPRAT  60
YNFYPQPDKT MIEVINEQFS QRLERMQLFY TEQVSLFPCA YEETQQALNH LWIAGNRLKD  120
GREAAMSYFL ATLSFIKILI KDFERRILEL EEANKAKKNF YVLFNGPKPG IYVEWAEVVG  180
LYPDSKSRQC KGYATLNDAI IAIRKAAVQN PYYDPKVIAV QEKQDANQVL QQPGNYQQLV  240
NDNIKQQLLE LQEENAKLLQ QQKELQETVA EKEKWIKDME MHFPGRGLGK AQQYPILGKQ  300
SRPIDLISNP FQISYHKPAV KKEEDRKPGQ LRFDDVFNRY AGEGSSSAIK GGDEHQEFLM  360
NIDQREVNLR PKGSPAKETR GLTEEQIERW AQGLTAQDQE LTEDEEVEGS QGSNNALSKE  420
EIMEITASVT QEVIRRVNQK KADKELCRYY LKNKLEGVIE TTPTIIPDCD IYRMEPWDVI  480
DAARALTEMP EAKWYLFCPY IRKWERNNRV NRCSPKGYWR ITGTPSIIEE NGEILAQKKT  540
ITYYLGRPAA AELTEWVMYE YSPYKLNTFA TWAVCALKYR GPSLRRRQVK ESSHLSDWDS  600
ILPLINHENA DIRLKRLLLR YRLSKAELKL KGKINLSLND RVSSEEKERR QMVVHMARKE  660
VEMLKEKVVQ IMHCHPRQIR EIIATEGGIP KEPFEDQRQR CAEEERYMEI EVRDEASTSA  720
PRLPPPATTA QIEEWLLEED RFNKGLGRPK YMLDTLAAYI SQLESLVKAT NTQTTLQQFN  780
KRIFEIERKF GCIGTTNPDA DKQETSLQKM TDDKGPTCNE KNTSKERSRA PRRIRCSHQE  840
ITDRTYSGHS DHYKHSFFGM ASNKMLKRSV SEGDLKKLKE RIEPVQKFQW FEEMQRRSKD  900
LQVRELVWRL NHERYMVRQV QLKNMRIQER LKEAEKMRDL IVKGHKSHER DLEEEIKMLR  960
KQNEVLRLPV CDQVRELTSR INAEKMKTRK LDFKDNEIPW EEDNVSQVSY EEFPKEAVQE  1020
KPNWEDPQWK NLSSDGYQKY QYKVKMSPPA WATNVDTALD PVQPTGWEDE EEMASQLLQR  1080
PWFKKIIEGS IAKYVKAMGE RIWKLSQRLG EAEARINELE EQNQRLLAKI AEQWRKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	1e-22	NAC family protein