PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP020495.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WRKY
Protein Properties Length: 280aa    MW: 30517.6 Da    PI: 10.3718
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP020495.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30204262259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                   D+++WrKYGqK++kgs++pr+YY+C++  gCp++k+ver+++dp+++++tYe eH+h+
  PCP020495.1 204 ADEFTWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAQDDPTMLVVTYEAEHHHP 262
                  69************************9888****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MAVDLVGFSK IDDRTAMQEA ASAGLQSMEH LIRALSNHPP SQTPLDCREI TDFTVTKFKQ  60
LISVLNRTGH ARFRRGPANP PSDPVHPKPQ TTLTVFQTPK SDKDSSTTLS PPLSTTSSFL  120
SSITIGDGSV SNGKAFSSIS VPPAPAFSAG KPPLPQSHRK RCHDGETAKT SSSGHCHCSK  180
RRKSKVKRTI RVPAVSSKIA DIPADEFTWR KYGQKPIKGS PYPRGYYKCS TVRGCPARKH  240
VERAQDDPTM LVVTYEAEHH HPHPSLTAAN VGLVFQSSKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31550.11e-101WRKY family protein