PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP020109.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 282aa MW: 32006.6 Da PI: 6.7261

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP020109.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	131.4	6.4e-41	4	141	1	127
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lelee.vikevdiykvePwdLpk...kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppG+rF Pt+eel+++yL++k++gk+ +++ + +++ v iy+++Pw+Lp+ +v++ + ++w+fF++r+ ++a+g r++r t++gyWkatg+ PCP020109.1 4 LPPGYRFYPTEEELISFYLQNKLDGKSedlNRVLDrIVPVVYIYEFNPWELPQvsgEVSHeDPEQWFFFIPRQASEARGGRPRRLTTTGYWKATGSPS 101 79***********************665333332578889******5456333314559***************************** PP NAM 91 evlsk...kgelvglkktLvfykgrapkgektdWvmheyr 127 +v+s+ ++ +g k+t+ fy grap+g+kt+W+m+ey+ PCP020109.1 102 TVYSSksnYNRPIGHKRTMGFYIGRAPRGKKTEWMMNEYK 141 85544555*************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 282 aa Download sequence
MEDLPPGYRF YPTEEELISF YLQNKLDGKS EDLNRVLDRI VPVVYIYEFN PWELPQVSGE 60 VSHEDPEQWF FFIPRQASEA RGGRPRRLTT TGYWKATGSP STVYSSKSNY NRPIGHKRTM 120 GFYIGRAPRG KKTEWMMNEY KAIEVHADHS NHLSMAASSS NSSSTPAPTL REEFSLCRVY 180 KKSKCLIRAF DRRPPGIEIT RNPSLIIQAA PAQGVNHLDH GSTTSNRNPQ NMGERTNLSS 240 LESSSSGNHG SQSSQPEQSG SLLMAVDNEA IWDWDELMDN WL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22380.1	4e-51	NAC family protein