PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP019966.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 277aa    MW: 29389.9 Da    PI: 8.8624
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP019966.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer96.42.3e-3048102257
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                  ++vrY+eClkNhA+ +Ggha+DGC+Ef+++ g +gt +alkCaAC+CHRnFHR+e 
  PCP019966.1  48 KAVRYRECLKNHAVGIGGHALDGCCEFLAA-GPDGTLDALKCAACNCHRNFHRKEG 102
                  579**************************9.999********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MEMTANYDSL GNSVGGRVKM SSSGPDGLAL AAAAAAAAAS EQQQQPRKAV RYRECLKNHA  60
VGIGGHALDG CCEFLAAGPD GTLDALKCAA CNCHRNFHRK EGDPAGHGLG VITDAYGQLV  120
PHHGQQHHPQ FSPYYRTPAG YLHMAAHHRP LALPSTSGGG GTYSGGQEQD DDVSNPSGGG  180
GGGGGSGGLG MGMGMHGTAS SGKKRFRTKF SQEQKERMLS LAERLGWRIQ KQDEPAVQQF  240
CNETGVKRHV LKVWMHNNKH TLGQHRDLVA SKLATMW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.11e-62ZF-HD family protein