PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019931.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 397aa MW: 44784.1 Da PI: 7.7946

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019931.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.9	3.4e-52	13	140	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 ++pGfrFhPtdeel+++yL+ kv + ++ i+evd++++ePw+Lp +k +++ewyfFs rd+ky+tg r+nrat +gyWkatgkd++v+s+ +g PCP019931.1 13 MQPGFRFHPTDEELITFYLASKVYNGSFCG-VRIAEVDLNRCEPWELPDVAKMGDREWYFFSLRDRKYPTGMRTNRATGAGYWKATGKDRQVFSAsTG 109 579**********************777.45***********888889***********************************98788 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 +l g+kktLvfykgrap+g+kt+Wvmheyrl PCP019931.1 110 ALLGVKKTLVFYKGRAPRGHKTKWVMHEYRL 140 89*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MNGSGEGVNE QGMQPGFRFH PTDEELITFY LASKVYNGSF CGVRIAEVDL NRCEPWELPD 60 VAKMGDREWY FFSLRDRKYP TGMRTNRATG AGYWKATGKD RQVFSASTGA LLGVKKTLVF 120 YKGRAPRGHK TKWVMHEYRL DGHFSSYRHA CKEEWVICRI NHKSGDKKSP LLVDHEAAAS 180 INSNCNYLPP LLDPSPALVL QESCHEFQNP MQLQVLPPPI HQDNHDPFFP AINAMQTHQL 240 PSFSNSLLFK SLFDQDCNSS SSTSTIPKQC KTELANYFSR FQTPGNSNNN NNNRTCNKLH 300 NLNLGVELEK NHAHQYQPNA PYHNRHQYND PLPFDYLDYS TSVLGFSAAE AATTTTITAS 360 ATVHAHDTSP SFAFDRAGFQ TMLDLPPIKR PGESCRP

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MNGSGEGVNE QGMQPGFRFH PTDEELITFY LASKVYNGSF CGVRIAEVDL NRCEPWELPD  60
VAKMGDREWY FFSLRDRKYP TGMRTNRATG AGYWKATGKD RQVFSASTGA LLGVKKTLVF  120
YKGRAPRGHK TKWVMHEYRL DGHFSSYRHA CKEEWVICRI NHKSGDKKSP LLVDHEAAAS  180
INSNCNYLPP LLDPSPALVL QESCHEFQNP MQLQVLPPPI HQDNHDPFFP AINAMQTHQL  240
PSFSNSLLFK SLFDQDCNSS SSTSTIPKQC KTELANYFSR FQTPGNSNNN NNNRTCNKLH  300
NLNLGVELEK NHAHQYQPNA PYHNRHQYND PLPFDYLDYS TSVLGFSAAE AATTTTITAS  360
ATVHAHDTSP SFAFDRAGFQ TMLDLPPIKR PGESCRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76420.1	4e-92	NAC family protein