PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP019787.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

Dof

Protein Properties

Length: 372aa MW: 40478.4 Da PI: 7.7742

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP019787.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	125.6	1.5e-39	69	129	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++ PCP019787.1 69 QQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 129 57899*****************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MLSNCDHEKM ALLISSTTNE WPQMQQDIQI DDIHHQKGLN NNNNAMSSST SSPANRIMEK 60 PGQEQLQLQQ QALKCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG 120 GCRKNKRVKR PGSTSSTSSA MDGGTPSSSC SVPSTTAAAN NNNANPNSHP SHIDQINPLF 180 YGLSSNPFMD TASGFDLHQL NHQAQLGLGF SSSSGTNMMS SDNYRNRFNP ASNSSLPSNY 240 SSMFSTSPSA TAPTVASVLA SKFINGGAFK DIQTRGPHQH NQYFQSLLPF EDLQIAAGSN 300 GEDGSASKDV KVEDHGGQNR LEWNNNNGSM NCQNQITEQM GLSDPTLYWN SSTLGSNWHD 360 PANLGSSVSS LI

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MLSNCDHEKM ALLISSTTNE WPQMQQDIQI DDIHHQKGLN NNNNAMSSST SSPANRIMEK  60
PGQEQLQLQQ QALKCPRCDS SNTKFCYYNN YSLSQPRHFC KACKRYWTRG GTLRNVPVGG  120
GCRKNKRVKR PGSTSSTSSA MDGGTPSSSC SVPSTTAAAN NNNANPNSHP SHIDQINPLF  180
YGLSSNPFMD TASGFDLHQL NHQAQLGLGF SSSSGTNMMS SDNYRNRFNP ASNSSLPSNY  240
SSMFSTSPSA TAPTVASVLA SKFINGGAFK DIQTRGPHQH NQYFQSLLPF EDLQIAAGSN  300
GEDGSASKDV KVEDHGGQNR LEWNNNNGSM NCQNQITEQM GLSDPTLYWN SSTLGSNWHD  360
PANLGSSVSS LI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	1e-35	Dof family protein