PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018839.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 921aa MW: 99785.2 Da PI: 7.3525

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018839.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.5	3.2e-08	206	233	2	29
SSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIar 29 ++W++ Ed+ l+ av+++G g+W+ I r PCP018839.1 206 KKWSEAEDLELIAAVQKHGEGNWANILR 233 69***********************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 921 aa Download sequence
MLEKAKDPKK GFITEEDTAT LLQRYAPTTV LALVQEVANY PDGKMDWNRL VANTSTGISN 60 AREYQMLWRH LAYREALLDK LDNGAQPLDD DSDLEYEVES FPAVSAQAST EAAACVKVLI 120 LSGLSSDVSH QNGLTVEGPL SMNLPNGQAS RSHQNSQATC SMRGKNITVP VSVLKNPLPV 180 VTASTVVTAE GDDALGNVMA PRKRSKKWSE AEDLELIAAV QKHGEGNWAN ILRGDFKGDR 240 TPSQLNQGDV AIYPVFVCDF VDFLSTLRWK KIRKNVGGGS SGKLSEAQAA ARHSLSIALN 300 MPNITANTIG TAGTSTHSKL AGTNATSNSV HCTTAEAKPQ SQQGLNPVKT YQTGLSGSTT 360 KAPVIAKKTI PKLTDSMVRA AAVAAGARIA FPSDAASLLK AAQAKNAVRI MPTSGSSTQS 420 VKPGSMSTHS ELPPNVHIMR SSSAAIPPSI PSSTAATPGT TRPRPSKVLP QASQHTPTSD 480 AMLSRQTNGV SCNLDAEPGS APTDQVQDGA VISRDGPNDR VQKDKSPDQK AQSKNLSTNA 540 ENPVDSLKIE RDETDSKAVT GVKAEERKSA KDNEIPCSSV NVGGSDPSAV DSCETEAQVR 600 STQIFSPLQQ MDARENRLAC QLFTSQVNMV EEIESSPRYK LPMSNEFVTT PNSEKKRNLF 660 SGMMKKMMKN VRLPSIFPLS FKIEPQLSLK KTKKVSFRQS SSPRPTIPPK NHARIDDDVV 720 QVSNKLFDQD DNLAAESFAF DSDKVVVQSP CKLDVDTGED FVFPILPNNP PNISVEETSN 780 LPTSNPTDDP FQKEYSSGGD HHHSADSRSF TQKIPWDGDF ELETSDAEVD ALSQLSNKLL 840 AANDRFFGCD EKERNPFGMP FIKVDEFPTS IKPPTTHPPG NKEESCSTTR IIKMKKKKKL 900 RDKRDCFLIS YYLLGTIPIV V

Sequence ? help Back to Top

Protein Sequence Length: 921 aa Download sequence

MLEKAKDPKK GFITEEDTAT LLQRYAPTTV LALVQEVANY PDGKMDWNRL VANTSTGISN  60
AREYQMLWRH LAYREALLDK LDNGAQPLDD DSDLEYEVES FPAVSAQAST EAAACVKVLI  120
LSGLSSDVSH QNGLTVEGPL SMNLPNGQAS RSHQNSQATC SMRGKNITVP VSVLKNPLPV  180
VTASTVVTAE GDDALGNVMA PRKRSKKWSE AEDLELIAAV QKHGEGNWAN ILRGDFKGDR  240
TPSQLNQGDV AIYPVFVCDF VDFLSTLRWK KIRKNVGGGS SGKLSEAQAA ARHSLSIALN  300
MPNITANTIG TAGTSTHSKL AGTNATSNSV HCTTAEAKPQ SQQGLNPVKT YQTGLSGSTT  360
KAPVIAKKTI PKLTDSMVRA AAVAAGARIA FPSDAASLLK AAQAKNAVRI MPTSGSSTQS  420
VKPGSMSTHS ELPPNVHIMR SSSAAIPPSI PSSTAATPGT TRPRPSKVLP QASQHTPTSD  480
AMLSRQTNGV SCNLDAEPGS APTDQVQDGA VISRDGPNDR VQKDKSPDQK AQSKNLSTNA  540
ENPVDSLKIE RDETDSKAVT GVKAEERKSA KDNEIPCSSV NVGGSDPSAV DSCETEAQVR  600
STQIFSPLQQ MDARENRLAC QLFTSQVNMV EEIESSPRYK LPMSNEFVTT PNSEKKRNLF  660
SGMMKKMMKN VRLPSIFPLS FKIEPQLSLK KTKKVSFRQS SSPRPTIPPK NHARIDDDVV  720
QVSNKLFDQD DNLAAESFAF DSDKVVVQSP CKLDVDTGED FVFPILPNNP PNISVEETSN  780
LPTSNPTDDP FQKEYSSGGD HHHSADSRSF TQKIPWDGDF ELETSDAEVD ALSQLSNKLL  840
AANDRFFGCD EKERNPFGMP FIKVDEFPTS IKPPTTHPPG NKEESCSTTR IIKMKKKKKL  900
RDKRDCFLIS YYLLGTIPIV V

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58220.1	2e-61	MYB_related family protein