PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP018574.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 248aa MW: 28237.5 Da PI: 6.3043 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.6 | 1.8e-47 | 4 | 135 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 l pG+rF Pt+eelv++yL++k++gk+ ++ +vi++vdiy+ ePwdLpk +++++++w+fF++r++++a+g r+nr+t sgyWkatg+ v+s PCP018574.1 4 LLPGYRFYPTEEELVSFYLHNKLQGKREDTCRVIPTVDIYSKEPWDLPKssgeLCRGDKEQWFFFTPRQQREAQGGRPNRTTGSGYWKATGSPGYVYS 101 579************************9999*****************646654445777************************************** PP NAM 95 kkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++++g+kkt+vfykg+ap+g+kt+W m+eyr+ PCP018574.1 102 SDNKVIGVKKTMVFYKGKAPTGRKTKWKMNEYRA 135 ********************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MEELLPGYRF YPTEEELVSF YLHNKLQGKR EDTCRVIPTV DIYSKEPWDL PKSSGELCRG 60 DKEQWFFFTP RQQREAQGGR PNRTTGSGYW KATGSPGYVY SSDNKVIGVK KTMVFYKGKA 120 PTGRKTKWKM NEYRAIEVDN STTNTPKLGH EFKLCRVYVV SGSSRAFDRR PLDPLGEAQQ 180 KFSDSTGAST SSLKTTMMEK ASASDETYSH SGELGDLPET SAGINSSNWE INEGFEEPLW 240 EWEQLNFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 2e-94 | NAC family protein |