PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018246.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 400aa MW: 45998.1 Da PI: 6.2639

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018246.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.7	6.9e-51	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eel+++yL+kkv+ ++++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s PCP018246.1 16 VPPGFRFHPTEEELLHYYLRKKVAFERIDL-DVIREVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKIIYS- 111 69**************************.9***********964444222455**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +gl+ktLvfykgrap+g+k+dW+mheyrl PCP018246.1 112 GFKRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 144 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MSDDHMSLSI NGQSQVPPGF RFHPTEEELL HYYLRKKVAF ERIDLDVIRE VDLNKLEPWD 60 IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATTAGFW KATGRDKIIY SGFKRIGLRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDESNST HDTTVSSSMG EPMTEEGWVV CRVFKKKNYQ 180 KALESPKASF SMDSSNNQIH GSRNDGVLDQ ILMYMGRTCK LENHDEPLTM NNISERFMHL 240 PRLESPFPNL PAFDQDRSFK ACYQAIDDMF IETEPPSTNQ QSNGCDNNEL VDDHEDPKRR 300 VNDWVTLDRL VASQLGQLNG QDQLTPKHLS CFGDPNMAFC SSPPPPNDHD HDVQLSYPYL 360 RTSSSSHHQS DVYNNENDLW NFTKSSSSPS SSDPLCHLSV

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MSDDHMSLSI NGQSQVPPGF RFHPTEEELL HYYLRKKVAF ERIDLDVIRE VDLNKLEPWD  60
IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATTAGFW KATGRDKIIY SGFKRIGLRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDESNST HDTTVSSSMG EPMTEEGWVV CRVFKKKNYQ  180
KALESPKASF SMDSSNNQIH GSRNDGVLDQ ILMYMGRTCK LENHDEPLTM NNISERFMHL  240
PRLESPFPNL PAFDQDRSFK ACYQAIDDMF IETEPPSTNQ QSNGCDNNEL VDDHEDPKRR  300
VNDWVTLDRL VASQLGQLNG QDQLTPKHLS CFGDPNMAFC SSPPPPNDHD HDVQLSYPYL  360
RTSSSSHHQS DVYNNENDLW NFTKSSSSPS SSDPLCHLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-111	NAC family protein