PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018133.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 934aa MW: 105179 Da PI: 6.1345

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018133.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.6	2.4e-36	737	860	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk... 95 lppGfrF+Ptdeelvv++L++k++ +++ +vi+++++y ++Pw+L+ k+ +e k+wyf+s+r+ +nr+t++gyWk+ g +++++s+ PCP018133.1 737 LPPGFRFDPTDEELVVHFLQRKATLLPFHP-DVIPDLHLYPYDPWELNGKALSEGKQWYFYSRRA--------QNRVTSNGYWKTLGIEEPIFSSsss 825 79***********************999.99**********97777889***985........589**************9776 PP NAM 96 .kgelvglkktLvfykgrapk.gektdWvmheyrl 128 ++++vg+k+ L+fy g+ap+ g kt+W+mheyrl PCP018133.1 826 nSTSKVGMKRYLTFYVGEAPNsGIKTNWIMHEYRL 860 66667******997765289*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 934 aa Download sequence
MSREEEEQCR LYEAYNELHG LAQAFDTPFD APAVLVVGHQ TDGKSALVEA LMGFQFNHVG 60 GGTKTRRPIT LHMKYDPHAH SPVCRLLLPS DSSSDYEKPL SLQEIQAYIE AENMRLEKEP 120 CLFSSKEIII RVEYKNCPNL TIIDTPGLIA PAPGPKNRAL QGQARAVEAL VRAKMQHKEF 180 IILCLEDCSD WSNATTRRVV MQIDPELSRT VIVSTKLDTK IPQFSRASDV EVFLSPPTCM 240 LDGCILGDSP FFTSVPSGRV GVGQDSVYRS NDEFKKAISL REMEDVAGLE ERMGRSLSMQ 300 ERSRIGVSKL RSFLEELLQK RYMDNVPLII PLLEKEFRSA TRKMNEINQE LSTLDELKLK 360 EKGRIFHDLF LTKLSLLLKG TVVAPPDKFG ETLQDERTNG GAFVSSDGLQ FPHKLIPNAG 420 MRLYGGAQYH RAMAEFRFVV GGIKCPPITR EEIVNACGVE DLHDGTNYSR TACVIAVAKA 480 RDTFEPFLHQ LGCRLLHILK RLLPISVYLL QKDGEYLSGH EVFLRRVASA FNDFAESTER 540 ACREKCMEDL VSTTRYVTWS LHNKNRAGLR QFLDSFTGTE HATTGGSGAS AGLSQDSSFG 600 SVTSEKDTKS RGDVKLSHVA SGADLTSSIH STETRLADLL DSTLWNRRLA PSSERIVYAL 660 VQQIFHGIKE YFLASAELKF NCFLLMPVVD KLPALLREDL KSAFEDDLDN IFDITNLRRS 720 LGQRKRDAEI EIKRFKLPPG FRFDPTDEEL VVHFLQRKAT LLPFHPDVIP DLHLYPYDPW 780 ELNGKALSEG KQWYFYSRRA QNRVTSNGYW KTLGIEEPIF SSSSSNSTSK VGMKRYLTFY 840 VGEAPNSGIK TNWIMHEYRL SSSASDCASS STTTTTPRSS KRRGQPKTEY SGYVLCRVFE 900 RDEEEDDDDD GTELSCLDEV FLSLDDLDEI SLPN

Sequence ? help Back to Top

Protein Sequence Length: 934 aa Download sequence

MSREEEEQCR LYEAYNELHG LAQAFDTPFD APAVLVVGHQ TDGKSALVEA LMGFQFNHVG  60
GGTKTRRPIT LHMKYDPHAH SPVCRLLLPS DSSSDYEKPL SLQEIQAYIE AENMRLEKEP  120
CLFSSKEIII RVEYKNCPNL TIIDTPGLIA PAPGPKNRAL QGQARAVEAL VRAKMQHKEF  180
IILCLEDCSD WSNATTRRVV MQIDPELSRT VIVSTKLDTK IPQFSRASDV EVFLSPPTCM  240
LDGCILGDSP FFTSVPSGRV GVGQDSVYRS NDEFKKAISL REMEDVAGLE ERMGRSLSMQ  300
ERSRIGVSKL RSFLEELLQK RYMDNVPLII PLLEKEFRSA TRKMNEINQE LSTLDELKLK  360
EKGRIFHDLF LTKLSLLLKG TVVAPPDKFG ETLQDERTNG GAFVSSDGLQ FPHKLIPNAG  420
MRLYGGAQYH RAMAEFRFVV GGIKCPPITR EEIVNACGVE DLHDGTNYSR TACVIAVAKA  480
RDTFEPFLHQ LGCRLLHILK RLLPISVYLL QKDGEYLSGH EVFLRRVASA FNDFAESTER  540
ACREKCMEDL VSTTRYVTWS LHNKNRAGLR QFLDSFTGTE HATTGGSGAS AGLSQDSSFG  600
SVTSEKDTKS RGDVKLSHVA SGADLTSSIH STETRLADLL DSTLWNRRLA PSSERIVYAL  660
VQQIFHGIKE YFLASAELKF NCFLLMPVVD KLPALLREDL KSAFEDDLDN IFDITNLRRS  720
LGQRKRDAEI EIKRFKLPPG FRFDPTDEEL VVHFLQRKAT LLPFHPDVIP DLHLYPYDPW  780
ELNGKALSEG KQWYFYSRRA QNRVTSNGYW KTLGIEEPIF SSSSSNSTSK VGMKRYLTFY  840
VGEAPNSGIK TNWIMHEYRL SSSASDCASS STTTTTPRSS KRRGQPKTEY SGYVLCRVFE  900
RDEEEDDDDD GTELSCLDEV FLSLDDLDEI SLPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64530.1	6e-69	NAC family protein