PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP018061.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NF-YC

Protein Properties

Length: 316aa MW: 35466.6 Da PI: 4.1213

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP018061.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	35.5	2.2e-11	106	190	13	96
NF-YC 13 atdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtd.ifdflvdiv 96 ++++ + e+P r+k+i+k d d+++i +ea l+s + +lf+ l+ rs a + kr+ +k + +v+r + +fl d+ PCP018061.1 106 NANLIRPEFPNGRVKRIMKLDRDINKINSEALLLVSYSAQLFLEFLAERSAEVATKRKRKVVKLEHMRVTVKRHRpTCEFLSDEL 190 66778889*************************************************************9998753889999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 316 aa Download sequence
MAEEEIAARE EENPAEEEEN PAQEEEENPV PEGEENPVPE EEENPAQEEE EESPAGEEEN 60 PAQEEEEENP VLEGEENPVP EEEENPAREK EKAAKGKGKA VAEEWNANLI RPEFPNGRVK 120 RIMKLDRDIN KINSEALLLV SYSAQLFLEF LAERSAEVAT KRKRKVVKLE HMRVTVKRHR 180 PTCEFLSDEL TVPSQPSDHR ATDRSQGRSV VSSSAPAKRD RSRPAAYRPA SAGTRRIDGF 240 FHKLAKKSPI QTEEAPIEID EASIETHDAP IEIDNGPITN DDAPIEVDDV PIESDEASIE 300 NEEPLIETHE APIEIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43250.1	2e-40	NF-YC family protein