PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017965.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 284aa    MW: 32976.8 Da    PI: 6.2406
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017965.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM126.71.9e-3971131106
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                  +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd+++     ++e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+vls 
  PCP017965.1   7 VPPGFRFHPTEEELVGYYLKRKINSLQIDL-DVIVDIDLYKIEPWDIQArckLGYSEKNEWYFFSHKDKKYPTGTRTNRATSAGFWKATGRDKAVLS- 102
                  69****************************.99**************953432234677**************************************. PP

          NAM  96 kgelvglkktL 106
                  k++ +g++ktL
  PCP017965.1 103 KNNIIGMRKTL 113
                  8899******9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MEMESCVPPG FRFHPTEEEL VGYYLKRKIN SLQIDLDVIV DIDLYKIEPW DIQARCKLGY  60
SEKNEWYFFS HKDKKYPTGT RTNRATSAGF WKATGRDKAV LSKNNIIGMR KTLEEGWVVC  120
RAFKKPSPSH RQGFEAWKHA YYVRDHASSS SFSSEMPMSM LINPNQGFHQ PFRSDQQDHF  180
VSNNIFLGNQ LMELPQLESP TISTSFVTKE NILNSTNLST EDYEDDRSNN NNSNQQIDWK  240
ILDNLLEVQF TDRASFSHPS LSSAPQYYEQ ETRSNHLLGC FQDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-81NAC family protein