PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP017031.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family ZF-HD
Protein Properties Length: 275aa    MW: 29560.9 Da    PI: 7.501
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP017031.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer97.78.5e-3161115257
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 
                  ++vrY+eClkNhA+ +Ggha+DGC+Ef+++ g egt +alkCaAC+CHRnFHR+e 
  PCP017031.1  61 KAVRYRECLKNHAVGIGGHALDGCCEFLAA-GPEGTLDALKCAACNCHRNFHRKEG 115
                  579**************************9.999********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MEFEDQEEHE EEMEMTANYD SLGNSVGGRV KMSSSGPDGL ALAAAATAAA AATQQQQQPR  60
KAVRYRECLK NHAVGIGGHA LDGCCEFLAA GPEGTLDALK CAACNCHRNF HRKEGEPPGH  120
GLGVLTDAYG QLVPHHGQQH HPHFSPYYRT PAGYLHVAAH HRLLALPSTS GGGGTHSGGQ  180
EQDDDVSNPS GGGGSGGLGM GMGMHGTASS GKKRFRTKFS QEQKERMLSL AERLGWRIQK  240
QDEPAVQQFC NETGVNRHVL KVWMHNNKHT LGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.14e-61ZF-HD family protein