PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP016763.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | C2H2 | ||||||||
Protein Properties | Length: 249aa MW: 28689.7 Da PI: 8.4634 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.2 | 0.0011 | 77 | 99 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 C+ Cgk F + L++H H PCP016763.1 77 CSydSCGKIFIDAGALRKHADIH 99 77779**************8877 PP | |||||||
2 | zf-C2H2 | 11.7 | 0.00082 | 190 | 209 | 5 | 23 |
TTTEEESSHHHHHHHHHH.T CS zf-C2H2 5 dCgksFsrksnLkrHirt.H 23 C+k++ + + LkrH r H PCP016763.1 190 GCNKTYIHEDKLKRHYRAvH 209 7***************9888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence |
MESQFHHNSS ERRPTFRSKT LPVKWFKECR SKVRYFYGTQ LQVLIVADTS EALDEKSKKT 60 MAPEPEPEPT TKVLFLCSYD SCGKIFIDAG ALRKHADIHA EIQHVCLYEG CGKVLFPDRK 120 FLDSSKMERH FLIHSEEKDY VCPREGCGKI DEPVSVPKYA TLPAEKQIRT PKPPYSKASS 180 DLSYACIYDG CNKTYIHEDK LKRHYRAVHP GHVFDVARNE IDEASDQDAY AGKRVNVKSQ 240 QNMLRPNWK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G06634.1 | 9e-55 | C2H2 family protein |