PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP016345.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 419aa    MW: 45584.5 Da    PI: 6.3541
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP016345.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.51.8e-11354399655
                  HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +++Er RR ri +++ +L+el+P+     +k    +++L +Av+YIk+Lq
  PCP016345.1 354 SIAERVRRTRISERMRKLQELVPNM----DKQAHTSDMLDLAVDYIKDLQ 399
                  689*********************7....5779999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MESDHQQHMN SSLTRYRSAP SSYFTNILDS EVCEPLFNRP SSPETERILA RFLASEGGGD  60
GGGGGGGGTE EIASQHKVET QINNQQPQFM VPKVDDEVGM IQQQQQQQSN LNNYSSVAQG  120
FYQPTSKPPL PNQNLNEGAY SMGGSHLPSV KTGGGVANSN LIRHSSSPAG LFSNMNIDGM  180
LFFSALMNSK RLSALRGMEN FGASNSTGEE ASFSSASRLK IFSSGPPSTS GLMSPIAEIG  240
NKRMRSNSQD AGGFGDGRGN NYVTGFPMDS WDDSAILGDD TGFRDDEVKA YTGLSPSETQ  300
DVEAGNHPPT LLAHHLSLPK TSTEMAAIEK FLQFQDSVPC KIRAKRGCAT HPRSIAERVR  360
RTRISERMRK LQELVPNMDK QAHTSDMLDL AVDYIKDLQT QVQTLSENRA KCTCSNKQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51140.14e-70bHLH family protein