PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016320.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 469aa MW: 53432.3 Da PI: 5.0031

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016320.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	77.4	3.3e-24	8	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p+G++FhP+d+elv +yL +k +g++++ e+vi+e+d+y + e +d+ + + ++++++yfF+k + ++ tg+r r++ sg+Wk +v++ PCP016320.1 8 PVGYKFHPRDDELVGYYLYNKFRGTPFRDENVIPEIDLYGSmEARDIWNnnggQNLEKDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAKVKD 105 89************************999***965499999633444333467799**********************9999999998 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e++g k + + + p+ e+ W+mhe++l PCP016320.1 106 PkTKETIGFFKRYQYKNTKYPQ-ESGCWIMHEFSL 139 7577789999999999888887.7999****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MAHSDTFPVG YKFHPRDDEL VGYYLYNKFR GTPFRDENVI PEIDLYGSME ARDIWNNNGG 60 QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AKVKDPKTKE TIGFFKRYQY 120 KNTKYPQESG CWIMHEFSLH PKQAMRIKSS PSSRPNDAEY VVCRVRKNFD RKRKADDHEE 180 TGVVQSQSKR IRMQSENIDE SYVTPMSSEV NSDHYNQQEQ EQTNINAIST SSSISVTNVD 240 QRRYYYCEPE QYSEVINQYD IPQQQEQATA TSDPLNVTNL RLAEQQHNFV TQDPTVASSS 300 LAMAGPDNQE QQVQSNVTDL PQYYYDTKEP MTTMATLDTY VCLPELNFVV DPAMASSLGM 360 SMSSQEDFLQ HNGFVSNVMT DLTRYYYSST QDPSSGTVSS QYDPPQSTAT TGFANQPHYF 420 VIQEHQPDYV VTDPTVASSL VHPILIRIII SWIRINFPLL LLTTPLVTS

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MAHSDTFPVG YKFHPRDDEL VGYYLYNKFR GTPFRDENVI PEIDLYGSME ARDIWNNNGG  60
QNLEKDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AKVKDPKTKE TIGFFKRYQY  120
KNTKYPQESG CWIMHEFSLH PKQAMRIKSS PSSRPNDAEY VVCRVRKNFD RKRKADDHEE  180
TGVVQSQSKR IRMQSENIDE SYVTPMSSEV NSDHYNQQEQ EQTNINAIST SSSISVTNVD  240
QRRYYYCEPE QYSEVINQYD IPQQQEQATA TSDPLNVTNL RLAEQQHNFV TQDPTVASSS  300
LAMAGPDNQE QQVQSNVTDL PQYYYDTKEP MTTMATLDTY VCLPELNFVV DPAMASSLGM  360
SMSSQEDFLQ HNGFVSNVMT DLTRYYYSST QDPSSGTVSS QYDPPQSTAT TGFANQPHYF  420
VIQEHQPDYV VTDPTVASSL VHPILIRIII SWIRINFPLL LLTTPLVTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	3e-18	NAC family protein