PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP016318.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 475aa MW: 54063.6 Da PI: 4.3816

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP016318.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.8	1.2e-24	8	139	2	128
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 p+G++FhP+d+elv +yL +kv+g++++ e+vi+e+d+y + e +d+ + + +e++++yfF+k + ++ tg+r r++ sg+Wk ev++ PCP016318.1 8 PVGYKFHPRDDELVGYYLYNKVRGTPFRDENVIPEIDLYGSmEARDIWNnnggQNLEEDEDLYFFTKLKPAKGTGSRVARTIGSGTWKGETAGAEVKD 105 89************************999***965499999632444333467799**********************9999999999 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e++g k + + + p+ e+ W+mhe++l PCP016318.1 106 PkTKETIGFFKRYQYKNTKYPQ-ESGCWIMHEFSL 139 7577789999999999888887.7999****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MAHSDTFPVG YKFHPRDDEL VGYYLYNKVR GTPFRDENVI PEIDLYGSME ARDIWNNNGG 60 QNLEEDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AEVKDPKTKE TIGFFKRYQY 120 KNTKYPQESG CWIMHEFSLH PKQVMRINSS PSSRPNDAEY VVCRVRKNFD RKRKADDHEE 180 SGVVQSQSKR IRMQSENIDE SYVTPMSSEV NSDRYNQQQQ EQTNINATST SSSMSVTNVD 240 QPLYYYCEPE QYSGVINQYE IPQATATSDP LNVTNLPTRL AEQQHYFVIQ DPTVASSSLA 300 MAGPDNQKQQ MQSNVTDLPQ YYYDTEEPMT IMAMPDDYVC VPELNFVVDP AMASSLGMSM 360 SSQEDYLQHN GFVTNVMTDL PQYYYSSTQD PSTVSSQYDP PQTAITGFAN QPHYFVTQDH 420 QPDYVVADPI VASSLASPAN LDQNHHIMDK DQLLPLNFDY TTGDIMIDLD DLWNN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MAHSDTFPVG YKFHPRDDEL VGYYLYNKVR GTPFRDENVI PEIDLYGSME ARDIWNNNGG  60
QNLEEDEDLY FFTKLKPAKG TGSRVARTIG SGTWKGETAG AEVKDPKTKE TIGFFKRYQY  120
KNTKYPQESG CWIMHEFSLH PKQVMRINSS PSSRPNDAEY VVCRVRKNFD RKRKADDHEE  180
SGVVQSQSKR IRMQSENIDE SYVTPMSSEV NSDRYNQQQQ EQTNINATST SSSMSVTNVD  240
QPLYYYCEPE QYSGVINQYE IPQATATSDP LNVTNLPTRL AEQQHYFVIQ DPTVASSSLA  300
MAGPDNQKQQ MQSNVTDLPQ YYYDTEEPMT IMAMPDDYVC VPELNFVVDP AMASSLGMSM  360
SSQEDYLQHN GFVTNVMTDL PQYYYSSTQD PSTVSSQYDP PQTAITGFAN QPHYFVTQDH  420
QPDYVVADPI VASSLASPAN LDQNHHIMDK DQLLPLNFDY TTGDIMIDLD DLWNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G24430.2	2e-19	NAC family protein