PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PCP015689.1

Organism

Pyrus communis

Taxonomic ID

23211

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus

Family

NAC

Protein Properties

Length: 400aa MW: 45884.9 Da PI: 5.7508

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PCP015689.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	163.7	6.9e-51	16	144	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 +ppGfrFhPt+eel+++yL+kkv+ ++++l +vi+evd++k+ePwd+++k+k +++wyfFs++dkky+tg+r+nrat++g+Wkatg+dk ++s PCP015689.1 16 VPPGFRFHPTEEELLHYYLRKKVAFERIDL-DVIREVDLNKLEPWDIQEKCKIgstPQNDWYFFSHKDKKYPTGTRTNRATTAGFWKATGRDKIIYS- 111 69**************************.9***********964444222455**********************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + +gl+ktLvfykgrap+g+k+dW+mheyrl PCP015689.1 112 GFKRIGLRKTLVFYKGRAPHGQKSDWIMHEYRL 144 9999*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 400 aa Download sequence
MSDDQMSLSI NGQSQVPPGF RFHPTEEELL HYYLRKKVAF ERIDLDVIRE VDLNKLEPWD 60 IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATTAGFW KATGRDKIIY SGFKRIGLRK 120 TLVFYKGRAP HGQKSDWIMH EYRLDESNTH ETTVSSSMGE SMTEDGWVVC RVFKKKNYQK 180 ALESPKASFS MDSSNNEMNG SRNDGVLDQI LMYMGRTTCK LENHDQSLTM NNISERFMHL 240 PRLESPTLPN LPAFDQERSF KACYSAIDDM FIETEPSSTN QPSNGCDNND LVDDHDYPKT 300 RLNDWATLDR LVASQLGQLN GQDPETPKHL SCFGDPNMAF CSSPHPNDQD NDVQLSYPYL 360 RTSRSSDHQS EVYNNENDLW NFTKSSSSPS SSDPLCHLSV

Sequence ? help Back to Top

Protein Sequence Length: 400 aa Download sequence

MSDDQMSLSI NGQSQVPPGF RFHPTEEELL HYYLRKKVAF ERIDLDVIRE VDLNKLEPWD  60
IQEKCKIGST PQNDWYFFSH KDKKYPTGTR TNRATTAGFW KATGRDKIIY SGFKRIGLRK  120
TLVFYKGRAP HGQKSDWIMH EYRLDESNTH ETTVSSSMGE SMTEDGWVVC RVFKKKNYQK  180
ALESPKASFS MDSSNNEMNG SRNDGVLDQI LMYMGRTTCK LENHDQSLTM NNISERFMHL  240
PRLESPTLPN LPAFDQERSF KACYSAIDDM FIETEPSSTN QPSNGCDNND LVDDHDYPKT  300
RLNDWATLDR LVASQLGQLN GQDPETPKHL SCFGDPNMAF CSSPHPNDQD NDVQLSYPYL  360
RTSRSSDHQS EVYNNENDLW NFTKSSSSPS SSDPLCHLSV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46770.1	1e-106	NAC family protein