PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PCP015511.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 243aa MW: 27532.1 Da PI: 7.9323 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57 | 3.3e-18 | 91 | 145 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ ++tkeq + Lee F++++++++ +++ LA++l+L+ rqV vWFqNrRa+ k PCP015511.1 91 RKKLRLTKEQSTLLEESFNRHNTLNQVQKQSLAEQLNLKPRQVEVWFQNRRARTK 145 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 118.5 | 3.8e-38 | 91 | 179 | 1 | 89 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLre 89 +kk+rl+keq++lLEesF+++++L++ +K++la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+ke +eL++ PCP015511.1 91 RKKLRLTKEQSTLLEESFNRHNTLNQVQKQSLAEQLNLKPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCESLSDENRRLKKELQELKS 179 69*************************************************************************************93 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGDVEEACNT KLQLGPGVCE YASRQEKKDN PLVCLDLSFA LCPKQEVPNL DDHIANGSSV 60 RTMDEDEESY ERSIDHTNNK SVIMNNKNGV RKKLRLTKEQ STLLEESFNR HNTLNQVQKQ 120 SLAEQLNLKP RQVEVWFQNR RARTKLKQTE VDCEFLKKCC ESLSDENRRL KKELQELKSL 180 NANGTSPLYI QIPKATMPPV CPSCEKMVKA HENNPAAAKN AEDLNVVRKS SNNKLQGGFD 240 GTN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 148 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-54 | HD-ZIP family protein |