PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP015215.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 441aa    MW: 50447.2 Da    PI: 6.1043
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP015215.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM74.72.2e-2331411128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev..ikevdiykv.ePwdLpkkvkaeek.......ewyfFskrdkkyatgkrknratksgy.Wkatg 87 
                  lp+G+rF Ptdeel+ +yL++kv+gk+++ +    + ++d+y v ePwd+ +k+k++++       ++yfF++ + k+++g+r  r+  sg  W+   
  PCP015215.1   3 LPAGYRFCPTDEELILYYLHPKVNGKEVPGQGNspVFDFDLYGVtEPWDIWEKFKTKREndlklsnDLYFFTTLKLKTTEGTRICRTLPSGSkWNGEN 100
                  799************************776543348899999866*****754433222223344477******************8887766***** PP

          NAM  88 kdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  +  e++++ ++ ++g kk + + k + ++ ++ +W+m e+ +
  PCP015215.1 101 RPSEIKNSgSEDVIGHKKRFSYRK-NGSDDQQDRWIMYEFDI 141
                  ******99556679*******985.555568********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 441 aa     Download sequence    
MTLPAGYRFC PTDEELILYY LHPKVNGKEV PGQGNSPVFD FDLYGVTEPW DIWEKFKTKR  60
ENDLKLSNDL YFFTTLKLKT TEGTRICRTL PSGSKWNGEN RPSEIKNSGS EDVIGHKKRF  120
SYRKNGSDDQ QDRWIMYEFD IDQKLVLEPK QENKIVLCML RKKVNGSEKK RKHGDLEDQE  180
VLGGNNMDIS NGDSNYGDLD RKQVVSLETQ EKQQCFLPSN AGYLIPRVQR PEIYDPLQQF  240
HRQSIVYNVV RPQTPLQLEQ VDFHGKQNWG LQHLHQGEET WKNKLLKTCI NNNIQGRASG  300
SEQNALQREE SREHQSFMSC ADNVQALGAD HEQSALLKEV NWRQQCSMPC LDSALQQAGE  360
NHQVQQSSQD NVANGSLINN NIPHCTEPVP PYGLTIDQVD HAGSRDVYGG FGAANDDFAY  420
TPWIKSFANE LLRINCSSKF N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24430.28e-16NAC family protein