PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PCP014943.1
Organism
Pyrus communis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
Family WOX
Protein Properties Length: 271aa    MW: 30403 Da    PI: 8.6734
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PCP014943.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox665e-213190357
                 --SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 +R+++tkeq++ Le+++++  r+psae++++++++l    +++ ++V++WFqN++a++++
  PCP014943.1 31 SRWNPTKEQIDMLENFYKQgVRTPSAEQIQQITSRLkafgHIEGKNVFYWFQNHKARQRQ 90
                 7*****************99**************************************96 PP
2Wus_type_Homeobox112.91.7e-363092365
  Wus_type_Homeobox  3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       ++RW+Pt+eQi +Le+ yk+G+rtP++e+iq+it++L+++G+ie+kNVfyWFQN+kaR+rqkq
        PCP014943.1 30 TSRWNPTKEQIDMLENFYKQGVRTPSAEQIQQITSRLKAFGHIEGKNVFYWFQNHKARQRQKQ 92
                       79***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEGDHHHSAV LLDQRHVQAG SGRAGDSGST SRWNPTKEQI DMLENFYKQG VRTPSAEQIQ  60
QITSRLKAFG HIEGKNVFYW FQNHKARQRQ KQKQESIAYN RLLHRRTTQP IFLPPYDLNP  120
PCPNVMCSPY YVPVHSELGF YPQSPYPNKV PLPGVPNVVK RRPRAEKLEK RRSTCTTGGA  180
GYEPMHPHNG YNTSGGSDMV NDATSKLISK CDQQTLPLFP LQPTGILQQG REDQNYPSTV  240
NDADCSSAAL IGSSADQIVG DQQPFYDFFS G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59340.16e-54WOX family protein