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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PCP014746.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Pyrus
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| Family | GeBP | ||||||||
| Protein Properties | Length: 314aa MW: 35977.4 Da PI: 5.1569 | ||||||||
| Description | GeBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | DUF573 | 70 | 4.7e-22 | 110 | 200 | 4 | 86 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgk....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk....aksgkepsfskehdq 86
+r+ws+eDe+ lL+G++d+ ++++ +++ fy+ +k +++++ sk+ +veK+rrLK+K+++ vkk +sgke++f+++hd+
PCP014746.1 110 KRVWSKEDELELLRGFLDYYGTRKTritkATAKETALFYDEIKPRLKLECSKTKMVEKLRRLKRKYHNVVKKmneiNSSGKEFRFKNAHDN 200
8******************66666545645566999**********************************998887789**********97 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 314 aa Download sequence |
MSSSSSSSYS SSEYESDYDD DICHHDPGNN NVRQAQKGHN VDDHEDDDDE NDVSYEPHEA 60 EDEDEVEEPK SSSTSDYSFT IYEPRAKRRR IDHENEALTS VQEEKKRRGK RVWSKEDELE 120 LLRGFLDYYG TRKTRITKAT AKETALFYDE IKPRLKLECS KTKMVEKLRR LKRKYHNVVK 180 KMNEINSSGK EFRFKNAHDN AREEDNVAAS SSVADHKRPT TSFDENNNVT NVDDNMNNGH 240 DVRGLIVELA MNPMPLSLRG KMGSGGGGGV GELVEDEKWR QQQILELEAY EKRLDLVQHQ 300 VKAALEELRS KGGA |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 87 | 91 | KRRRI |
| 2 | 87 | 108 | KRRRIDHENEALTSVQEEKKRR |
| 3 | 87 | 110 | KRRRIDHENEALTSVQEEKKRRGK |
| 4 | 88 | 109 | KRRRIDHENEALTSVQEEKKRR |
| 5 | 105 | 110 | KKRRGK |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT3G04930.2 | 9e-20 | GeBP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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